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contig_metadata

31 rows where analysis = "blastn", bioproject = "PRJNA700095" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 31 ✖

bioproject 1

  • PRJNA700095 · 31 ✖

analysis 1

  • blastn · 31 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
683207 683207 PRJNA700095_P_NODE_34741_length_290_cov_1.304147_g33477_i0 PRJNA700095 34741 290 1.304147 3.7820263 Caudoviricetes sp. 2832643 Viruses Viruses 497 2.8699999999999993e-136   NTclustered gi|2058084452|tpg|BK043206.1| 2832643 g33477 i0 97.586 3.39310344827586 290 7 100 0 1 290 4483 4194 MAG TPA_asm: Caudoviricetes sp. isolate ctdEQ13, partial genome blastn 984 497 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
683226 683226 PRJNA700095_P_NODE_38521_length_279_cov_10.864078_g37257_i0 PRJNA700095 38521 279 10.864078 30.31077762 Caudoviricetes sp. 2832643 Viruses Viruses 466 7.74e-127   NTclustered gi|2914852811|gb|OR221766.1| 2832643 g37257 i0 98.491 0.949820788530466 265 3 95 1 14 278 16601 16338 MAG: Caudoviricetes sp. isolate MSP1259 genomic sequence blastn 265 466 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
683344 683344 PRJNA700095_P_NODE_62181_length_243_cov_0.905882_g60917_i0 PRJNA700095 62181 243 0.905882 2.20129326 Potexvirus flavitrifolii 3433843 Viruses Viruses 394 3.16e-105   NTclustered gi|2329659981|gb|OK558678.1| 12177 g60917 i0 95.885 6 243 10 100 0 1 243 6561 6319 Clover yellow mosaic virus isolate Tantalus ORF1, ORF2, ORF3, ORF4, and ORF5 genes, complete cds blastn 1458 394 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus flavitrifolii
1184262 1184262 PRJNA700095_P_NODE_61661_length_243_cov_2.694118_g60397_i0 PRJNA700095 61661 243 2.694118 6.54670674 root 1 Root_unresolved Root_unresolved 444 3.09e-120   NTclustered gi|2057095035|tpg|BK038203.1| 38018 g60397 i0 99.588 15 243 1 100 0 1 243 53999 54241 MAG TPA_asm: Bacteriophage sp. isolate ctz9y1, partial genome blastn 3645 444 1 Viruses               Bacteriophage sp.
3234338 3234338 PRJNA700095_P_NODE_69683_length_221_cov_4.087838_g68418_i0 PRJNA700095 69683 221 4.087838 9.03412198 Caudoviricetes sp. 2832643 Viruses Viruses 409 1.0100000000000001e-109   NTclustered gi|2914852811|gb|OR221766.1| 2832643 g68418 i0 100 1 221 0 100 0 1 221 36821 36601 MAG: Caudoviricetes sp. isolate MSP1259 genomic sequence blastn 221 409 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
4511188 4511188 PRJNA700095_P_NODE_29284_length_314_cov_1.784232_g28020_i0 PRJNA700095 29284 314 1.784232 5.60248848 Potexvirus trifolii 3433859 Viruses Viruses 523 5.18e-144   NTclustered gi|1843793411|gb|MN399740.1| 12188 g28020 i0 96.805 19.9267515923567 313 10 99 0 1 313 1762 1450 White clover mosaic virus isolate Muenster_18 RNA replication protein, triple gene block protein 1, triple gene block protein 2, triple gene block protein 3, and coat protein genes, complete cds blastn 6257 523 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
4511286 4511286 PRJNA700095_P_NODE_4724_length_910_cov_1.492234_g3775_i0 PRJNA700095 4724 910 1.492234 13.5793294 Potexvirus trifolii 3433859 Viruses Viruses 1528 0   NTclustered gi|1389531330|gb|MG600296.1| 12188 g3775 i0 96.93 24.2692307692308 912 26 100 1 1 910 162 1073 White clover mosaic virus isolate WCMV-PV1 putative replicase protein and putative TGB1 protein genes, complete cds; and putative TGB2 protein gene, partial cds blastn 22085 1528 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
5012439 5012439 PRJNA700095_P_NODE_19584_length_400_cov_2.926606_g18321_i0 PRJNA700095 19584 400 2.926606 11.706424 root 1 Root_unresolved Root_unresolved 734 0   NTclustered gi|2057095035|tpg|BK038203.1| 38018 g18321 i0 99.75 11 400 1 100 0 1 400 91944 92343 MAG TPA_asm: Bacteriophage sp. isolate ctz9y1, partial genome blastn 4400 739 0.993234100135318 Viruses               Bacteriophage sp.
5786719 5786719 PRJNA700095_P_NODE_39485_length_277_cov_1.509804_g38221_i0 PRJNA700095 39485 277 1.509804 4.18215708 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.025   NTclustered gi|9964314|ref|NC_002520.1| 28321 g38221 i0 94.286 0.126353790613718 35 1 12 1 204 237 153509 153475 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei
5786741 5786741 PRJNA700095_P_NODE_42145_length_270_cov_2.350254_g40881_i0 PRJNA700095 42145 270 2.350254 6.3456858 Potexvirus flavitrifolii 3433843 Viruses Viruses 405 1.65e-108   NTclustered gi|9629178|ref|NC_001753.1| 12177 g40881 i0 93.704 5 270 17 100 0 1 270 4703 4972 Clover yellow mosaic virus, complete genome blastn 1350 405 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus flavitrifolii
8336548 8336548 PRJNA700095_P_NODE_68867_length_228_cov_2.683871_g67602_i0 PRJNA700095 68867 228 2.683871 6.11922588 Potexvirus flavitrifolii 3433843 Viruses Viruses 361 2.97e-95   NTclustered gi|9629178|ref|NC_001753.1| 12177 g67602 i0 95.175 5.63157894736842 228 11 100 0 1 228 978 751 Clover yellow mosaic virus, complete genome blastn 1284 361 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus flavitrifolii
9611680 9611680 PRJNA700095_P_NODE_37908_length_281_cov_1.596154_g36644_i0 PRJNA700095 37908 281 1.596154 4.48519274 Potexvirus flavitrifolii 3433843 Viruses Viruses 459 1.31e-124   NTclustered gi|2329659981|gb|OK558678.1| 12177 g36644 i0 96.085 8.94306049822064 281 11 100 0 1 281 653 373 Clover yellow mosaic virus isolate Tantalus ORF1, ORF2, ORF3, ORF4, and ORF5 genes, complete cds blastn 2513 459 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus flavitrifolii
9611731 9611731 PRJNA700095_P_NODE_45728_length_262_cov_1.624339_g44464_i0 PRJNA700095 45728 262 1.624339 4.25576818 Caudoviricetes sp. 2832643 Viruses Viruses 398 2.6699999999999996e-106   NTclustered gi|2058009375|tpg|BK041711.1| 2832643 g44464 i0 94.275 99.4732824427481 262 12 100 1 1 262 22021 22279 MAG TPA_asm: Caudoviricetes sp. isolate ctufG1, partial genome blastn 26062 398 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
9611764 9611764 PRJNA700095_P_NODE_51748_length_250_cov_9.853107_g50484_i0 PRJNA700095 51748 250 9.853107 24.6327675 Caudoviricetes sp. 2832643 Viruses Viruses 462 8.83e-126   NTclustered gi|2914852811|gb|OR221766.1| 2832643 g50484 i0 100 1 250 0 100 0 1 250 120 369 MAG: Caudoviricetes sp. isolate MSP1259 genomic sequence blastn 250 462 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
10887182 10887182 PRJNA700095_P_NODE_19869_length_396_cov_7.897833_g18606_i0 PRJNA700095 19869 396 7.897833 31.27541868 Caudoviricetes sp. 2832643 Viruses Viruses 732 0   NTclustered gi|2914852811|gb|OR221766.1| 2832643 g18606 i0 100 1 396 0 100 0 1 396 19315 18920 MAG: Caudoviricetes sp. isolate MSP1259 genomic sequence blastn 396 732 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
10887368 10887368 PRJNA700095_P_NODE_58389_length_246_cov_0.884393_g57125_i0 PRJNA700095 58389 246 0.884393 2.17560678 Potexvirus flavitrifolii 3433843 Viruses Viruses 394 3.2e-105   NTclustered gi|9629178|ref|NC_001753.1| 12177 g57125 i0 95.528 5 246 11 100 0 1 246 3352 3597 Clover yellow mosaic virus, complete genome blastn 1230 394 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus flavitrifolii
10887385 10887385 PRJNA700095_P_NODE_60409_length_244_cov_1.701754_g59145_i0 PRJNA700095 60409 244 1.701754 4.15227976 Potexvirus trifolii 3433859 Viruses Viruses 374 4.1399999999999986e-99   NTclustered gi|1967559262|gb|MT151614.1| 12188 g59145 i0 94.262 19.5 244 14 100 0 1 244 1445 1202 White clover mosaic virus isolate Heron RNA replication protein, triple gene block protein 1, triple gene block protein 2, triple gene block protein 3, and coat protein genes, complete cds blastn 4758 374 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
10887418 10887418 PRJNA700095_P_NODE_66469_length_239_cov_2.259036_g65205_i0 PRJNA700095 66469 239 2.259036 5.39909604 uncultured phage 278008 Viruses Viruses 56.5 0.002   NTclustered gi|156572143|gb|EF636862.1| 278008 g65205 i0 100 0.125523012552301 30 0 13 0 210 239 90 61 Uncultured phage clone S26 unknown sequence blastn 30 56.5 1 Viruses               uncultured phage
12162300 12162300 PRJNA700095_P_NODE_26170_length_335_cov_1.835878_g24906_i0 PRJNA700095 26170 335 1.835878 6.1501913 Caudoviricetes sp. 2832643 Viruses Viruses 617 2.48e-172   NTclustered gi|2914852811|gb|OR221766.1| 2832643 g24906 i0 100 0.997014925373134 334 0 99 0 2 335 44184 43851 MAG: Caudoviricetes sp. isolate MSP1259 genomic sequence blastn 334 617 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
13436869 13436869 PRJNA700095_P_NODE_18731_length_412_cov_2.327434_g17468_i0 PRJNA700095 18731 412 2.327434 9.58902808 Caudoviricetes sp. 2832643 Viruses Viruses 62.1 6.58e-5   NTclustered gi|2059632675|tpg|BK028438.1| 2832643 g17468 i0 92.857 2.11165048543689 42 3 10 0 285 326 42472 42431 MAG TPA_asm: Caudoviricetes sp. isolate ctawJ4, partial genome blastn 870 62.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
13436961 13436961 PRJNA700095_P_NODE_41151_length_273_cov_1.365000_g39887_i0 PRJNA700095 41151 273 1.365 3.72645 Caudoviricetes sp. 2832643 Viruses Viruses 455 1.6300000000000002e-123   NTclustered gi|2914967290|gb|OR222019.1| 2832643 g39887 i0 96.727 92.4981684981685 275 6 100 3 1 273 50339 50066 MAG: Caudoviricetes sp. isolate MSP0103 genomic sequence blastn 25252 455 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
14712214 14712214 PRJNA700095_P_NODE_42092_length_270_cov_3.862944_g40828_i0 PRJNA700095 42092 270 3.862944 10.4299488 Potexvirus trifolii 3433859 Viruses Viruses 453 5.810000000000001e-123   NTclustered gi|1843793417|gb|MN399741.1| 12188 g40828 i0 97.026 19.9444444444444 269 8 99 0 1 269 3514 3782 White clover mosaic virus isolate Kreis Stormarn_17 RNA replication protein, triple gene block protein 1, triple gene block protein 2, triple gene block protein 3, and coat protein genes, complete cds blastn 5385 453 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
15985740 15985740 PRJNA700095_P_NODE_21933_length_373_cov_1.176667_g20669_i0 PRJNA700095 21933 373 1.176667 4.38896791 Bacteriophage sp. 38018 Viruses Viruses 71.3 9.8e-8   NTclustered gi|2295406664|gb|OP075817.1| 38018 g20669 i0 95.455 9.32975871313673 44 2 12 0 2 45 39731 39774 MAG: Bacteriophage sp. isolate 3806_49660, partial genome blastn 3480 71.3 1 Viruses               Bacteriophage sp.
15985846 15985846 PRJNA700095_P_NODE_45613_length_262_cov_2.402116_g44349_i0 PRJNA700095 45613 262 2.402116 6.29354392 Staphylococcus phage S-CoN_Ph28 3076585 Viruses Viruses 451 2.02e-122   NTclustered gi|2582095076|gb|OR354851.1| 3076585 g44349 i0 97.71 21.9961832061069 262 6 100 0 1 262 4964 4703 Staphylococcus phage S-CoN_Ph28, complete genome blastn 5763 451 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Rountreeviridae Andhravirus Staphylococcus phage S-CoN_Ph28
17261005 17261005 PRJNA700095_P_NODE_17934_length_424_cov_2.116809_g16671_i0 PRJNA700095 17934 424 2.116809 8.9752701600000009 Potexvirus flavitrifolii 3433843 Viruses Viruses 640 6.85e-179   NTclustered gi|2329659981|gb|OK558678.1| 12177 g16671 i0 93.868 5.2122641509434 424 26 100 0 1 424 5026 4603 Clover yellow mosaic virus isolate Tantalus ORF1, ORF2, ORF3, ORF4, and ORF5 genes, complete cds blastn 2210 640 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus flavitrifolii
20310545 20310545 PRJNA700095_P_NODE_36336_length_285_cov_2.127358_g35072_i0 PRJNA700095 36336 285 2.127358 6.0629703 root 1 Root_unresolved Root_unresolved 527 3.59e-145   NTclustered gi|2057095035|tpg|BK038203.1| 38018 g35072 i0 100 11 285 0 100 0 1 285 91601 91885 MAG TPA_asm: Bacteriophage sp. isolate ctz9y1, partial genome blastn 3135 527 1 Viruses               Bacteriophage sp.
22360305 22360305 PRJNA700095_P_NODE_22318_length_369_cov_1.304054_g21054_i0 PRJNA700095 22318 369 1.304054 4.81195926 Citrus endogenous pararetrovirus 1435008 Viruses Viruses 562 1.31e-155   NTclustered gi|1189354729|gb|KY609920.1| 1435008 g21054 i0 94.086 7.55013550135501 372 19 100 1 1 369 2255 1884 Citrus endogenous pararetrovirus strain SPBR01 polyprotein gene, complete cds blastn 2786 562 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Citrus endogenous pararetrovirus
22360459 22360459 PRJNA700095_P_NODE_51358_length_251_cov_0.865169_g50094_i0 PRJNA700095 51358 251 0.865169 2.17157419 Carlavirus latensallii 3427762 Viruses Viruses 381 2.549999999999999e-101   NTclustered gi|359471925|gb|JF320810.1| 47900 g50094 i0 94.024 13.9880478087649 251 15 100 0 1 251 2812 3062 Garlic common latent virus isolate WA-1, complete genome blastn 3511 381 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensallii
24909527 24909527 PRJNA700095_P_NODE_36300_length_285_cov_2.778302_g35036_i0 PRJNA700095 36300 285 2.778302 7.9181607 Caudoviricetes sp. 2832643 Viruses Viruses 527 3.59e-145   NTclustered gi|2914852811|gb|OR221766.1| 2832643 g35036 i0 100 1.09824561403509 285 0 100 0 1 285 21395 21111 MAG: Caudoviricetes sp. isolate MSP1259 genomic sequence blastn 313 527 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
24909709 24909709 PRJNA700095_P_NODE_70220_length_211_cov_5.695652_g68955_i0 PRJNA700095 70220 211 5.695652 12.01782572 Caudoviricetes sp. 2832643 Viruses Viruses 390 3.459999999999999e-104   NTclustered gi|2914852811|gb|OR221766.1| 2832643 g68955 i0 100 1 211 0 100 0 1 211 6919 7129 MAG: Caudoviricetes sp. isolate MSP1259 genomic sequence blastn 211 390 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
25410831 25410831 PRJNA700095_P_NODE_69440_length_226_cov_2.006536_g68175_i0 PRJNA700095 69440 226 2.006536 4.53477136 Pahexavirus 1982251 Viruses Viruses 412 8.01e-111   NTclustered gi|1631925795|ref|NC_041954.1| 1655013 g68175 i0 99.558 86.6637168141593 226 1 100 0 1 226 26821 27046 Propionibacterium phage Keiki, complete genome blastn 19586 412 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Pahexavirus Pahexavirus keiki

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;