RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA700095" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA700095 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1959142 1959142 PRJNA700095_P_NODE_24422_length_348_cov_7.407273_g23158_i0 PRJNA700095 24422 348 7.407273 25.77731004 Adineta vaga 104782 Rotifera other_Eukaryota 632 9.25e-177   NTclustered gi|72153731|gb|DQ089739.1| 104782 g23158 i0 99.425 68.6005747126437 348 2 100 0 1 348 2460 2807 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 23873 632 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
4511164 4511164 PRJNA700095_P_NODE_24784_length_345_cov_16.283088_g23520_i0 PRJNA700095 24784 345 16.283088 56.1766536 Adineta vaga 104782 Rotifera other_Eukaryota 632 9.17e-177   NTclustered gi|259129963|gb|GQ398061.1| 104782 g23520 i0 99.71 4.4 345 1 100 0 1 345 10394 10050 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 1518 632 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
10112754 10112754 PRJNA700095_P_NODE_16708_length_444_cov_3.153639_g15445_i0 PRJNA700095 16708 444 3.153639 14.00215716 Philodinida 104783 Rotifera other_Eukaryota 525 2.1099999999999993e-144   NTclustered gi|402761757|gb|JX184010.1| 104786 g15445 i0 88.09 34.6734234234234 445 49 99 3 1 443 194 636 Habrotrocha constricta cytochrome c oxidase subunit 2 (COX2) gene, complete cds; mitochondrial blastn 15395 525 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
12162263 12162263 PRJNA700095_P_NODE_18030_length_422_cov_15.495702_g16767_i0 PRJNA700095 18030 422 15.495702 65.39186244 Adineta vaga 104782 Rotifera other_Eukaryota 780 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g16767 i0 100 84.1706161137441 422 0 100 0 1 422 4171 4592 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 35520 780 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
13436843 13436843 PRJNA700095_P_NODE_10211_length_608_cov_3.792523_g8977_i0 PRJNA700095 10211 608 3.792523 23.05853984 Habrotrocha constricta 104786 Rotifera other_Eukaryota 558 2.91e-154   NTclustered gi|402761773|gb|JX184018.1| 104786 g8977 i0 83.416 2.56414473684211 603 98 99 2 1 602 25 626 Habrotrocha constricta cytochrome c oxidase subunit 3 (COX3) gene, complete cds; mitochondrial blastn 1559 558 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
17261300 17261300 PRJNA700095_P_NODE_8314_length_685_cov_4.282680_g7142_i0 PRJNA700095 8314 685 4.28268 29.336358 Habrotrocha constricta 104786 Rotifera other_Eukaryota 675 0   NTclustered gi|402761805|gb|JX184034.1| 104786 g7142 i0 84.728 13.7416058394161 681 97 99 6 4 679 28 706 Habrotrocha constricta NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial blastn 9413 675 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
18535178 18535178 PRJNA700095_P_NODE_6675_length_768_cov_44.955396_g5582_i0 PRJNA700095 6675 768 44.955396 345.25744128 Philodina citrina 468664 Rotifera other_Eukaryota 793 0   NTclustered gi|407227484|emb|FR856884.1| 468664 g5582 i0 86.193 25.7760416666667 746 87 96 15 3 741 1657 2393 Philodina citrina complete mitochondrial genome blastn 19796 793 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
19035946 19035946 PRJNA700095_P_NODE_22535_length_366_cov_27.498294_g21271_i0 PRJNA700095 22535 366 27.498294 100.64375604 Opisthokonta 33154 Rotifera other_Eukaryota 643 4.5099999999999985e-180   NTclustered gi|259129963|gb|GQ398061.1| 104782 g21271 i0 98.361 77.7814207650273 366 6 100 0 1 366 7010 6645 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 28468 649 0.99075500770416 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
20310472 20310472 PRJNA700095_P_NODE_10976_length_582_cov_12.383104_g9735_i0 PRJNA700095 10976 582 12.383104 72.06966528 Adineta 104781 Rotifera other_Eukaryota 1064 0   NTclustered gi|72153731|gb|DQ089739.1| 104782 g9735 i0 99.656 43.585910652921 582 2 100 0 1 582 2103 1522 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 25367 1064 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
20310523 20310523 PRJNA700095_P_NODE_26616_length_331_cov_12.740310_g25352_i0 PRJNA700095 26616 331 12.74031 42.1704261 Adinetidae 104780 Rotifera other_Eukaryota 601 2.4699999999999994e-167   NTclustered gi|2537903787|gb|KM043252.2| 104782 g25352 i0 99.396 99.987915407855 331 2 100 0 1 331 919 589 Adineta vaga voucher AD005 18S ribosomal RNA gene, partial sequence blastn 33096 601 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
22360518 22360518 PRJNA700095_P_NODE_6218_length_795_cov_2.570637_g5149_i0 PRJNA700095 6218 795 2.570637 20.43656415 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 857 0   NTclustered gi|402761779|gb|JX184021.1| 104788 g5149 i0 86.164 40.4452830188679 795 108 99 2 1 794 902 109 Macrotrachela quadricornifera isolate HR cytochrome b (CYTB) gene, complete cds; mitochondrial blastn 32154 857 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
24909414 24909414 PRJNA700095_P_NODE_14320_length_492_cov_6.744630_g13061_i0 PRJNA700095 14320 492 6.74463 33.1835796 Adineta vaga 104782 Rotifera other_Eukaryota 776 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g13061 i0 95.132 97.4959349593496 493 22 100 2 1 492 7507 7016 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 47968 776 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;