RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA700095" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA700095 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4511414 4511414 PRJNA700095_P_NODE_69284_length_226_cov_2.928105_g68019_i0 PRJNA700095 69284 226 2.928105 6.6175173 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 366 6.32e-97   NTclustered gi|60598655|gb|AY809988.1| 6182 g68019 i0 99.02 100.194690265487 204 2 90 0 21 224 662 459 Schistosoma japonicum SJCHGC09533 protein mRNA, partial cds blastn 22644 366 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
15985763 15985763 PRJNA700095_P_NODE_27313_length_326_cov_22.517787_g26049_i0 PRJNA700095 27313 326 22.517787 73.40798562 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 503 7.039999999999998e-138   NTclustered gi|56757963|gb|AY815390.1| 6182 g26049 i0 95.092 124.898773006135 326 5 100 2 1 326 1610 1924 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 40717 503 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
19810096 19810096 PRJNA700095_P_NODE_33916_length_293_cov_1.500000_g32652_i0 PRJNA700095 33916 293 1.5 4.395 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 503 6.24e-138   NTclustered gi|60698688|gb|AY915747.1| 6182 g32652 i0 97.611 2.44027303754266 293 7 100 0 1 293 402 110 Schistosoma japonicum SJCHGC09661 protein mRNA, partial cds blastn 715 503 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;