RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA700095" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA700095 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5786622 5786622 PRJNA700095_P_NODE_23065_length_361_cov_2.319444_g21801_i0 PRJNA700095 23065 361 2.319444 8.37319284 Spiroplasma corruscae 216934 Bacteria Bacteria 52.8 0.034   NTclustered gi|1226105578|gb|CP022535.1| 216934 g21801 i0 100 0.0775623268698061 28 0 8 0 259 286 663465 663438 Spiroplasma corruscae strain EC-1 chromosome, complete genome blastn 28 52.8 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Spiroplasmataceae Spiroplasma Spiroplasma corruscae
13436845 13436845 PRJNA700095_P_NODE_11071_length_580_cov_2.112426_g9830_i0 PRJNA700095 11071 580 2.112426 12.2520708 Mycoplasma sp. (ex Biomphalaria glabrata) 1749074 Bacteria Bacteria 204 1.4899999999999999e-47   NTclustered gi|971185387|gb|CP013128.1| 1749074 g9830 i0 81.818 41.6741379310345 242 44 42 0 15 256 412988 412747 Mycoplasma sp. (ex Biomphalaria glabrata) isolate Barreiro1 chromosome, complete genome blastn 24171 204 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma sp. (ex Biomphalaria glabrata)

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;