RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA700095" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA700095 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6288306 6288306 PRJNA700095_P_NODE_66945_length_236_cov_5.723926_g65681_i0 PRJNA700095 66945 236 5.723926 13.50846536 Ellisella 328399 Cnidaria other_Eukaryota 97.1 9.64e-16   NTclustered gi|2689317297|gb|PP410744.1| 2751895 g65681 i0 95.161 24.0042372881356 62 2 26 1 155 216 3528 3588 Ellisella elongata voucher USNM:1660444 large subunit ribosomal RNA gene, partial sequence blastn 5665 97.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleralcyonacea Ellisellidae Ellisella Ellisella elongata
8336280 8336280 PRJNA700095_P_NODE_17507_length_430_cov_19.109244_g16244_i0 PRJNA700095 17507 430 19.109244 82.1697492 Eunicella cavolini 317547 Cnidaria other_Eukaryota 207 8.37e-49   NTclustered gi|2918369552|emb|OZ237724.1| 317547 g16244 i0 82.627 4.61395348837209 236 39 55 2 125 359 198087 197853 Eunicella cavolini genome assembly, chromosome: 8 blastn 1984 207 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
9611647 9611647 PRJNA700095_P_NODE_30548_length_309_cov_2.576271_g29284_i0 PRJNA700095 30548 309 2.576271 7.96067739 Xenia sp. Carnegie-2017 2897299 Cnidaria other_Eukaryota 75 6.16e-9   NTclustered gi|2202626640|ref|XM_046990664.1| 2897299 g29284 i0 86.567 0.867313915857605 67 9 22 0 135 201 2534 2600 PREDICTED: Xenia sp. Carnegie-2017 deleted in malignant brain tumors 1 protein-like (LOC124440303), transcript variant X4, mRNA blastn 268 75 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
15212781 15212781 PRJNA700095_P_NODE_40332_length_275_cov_1.450495_g39068_i0 PRJNA700095 40332 275 1.450495 3.98886125 Metazoa 33208 Cnidaria other_Eukaryota 91.6 5.36e-14   NTclustered gi|2744908866|ref|XM_065819693.1| 6087 g39068 i0 98.077 11.3345454545455 52 1 19 0 217 268 434 485 PREDICTED: Hydra vulgaris uncharacterized LOC136091973 (LOC136091973), mRNA blastn 3117 91.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;