RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA700095" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA700095 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3234072 3234072 PRJNA700095_P_NODE_17403_length_432_cov_3.317549_g16140_i0 PRJNA700095 17403 432 3.317549 14.33181168 Borealophlyctis nickersoniae 2735257 Fungi Fungi 551 3.3699999999999985e-152   NTclustered gi|1866582845|gb|MT731020.1| 2735257 g16140 i0 89.655 100.268518518519 435 41 100 3 1 432 5091 4658 Borealophlyctis nickersoniae isolate WJD171 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 43316 551 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Borealophlyctidaceae Borealophlyctis Borealophlyctis nickersoniae
3234150 3234150 PRJNA700095_P_NODE_32443_length_299_cov_6.557522_g31179_i0 PRJNA700095 32443 299 6.557522 19.60699078 Spizellomyces punctatus 109760 Fungi Fungi 222 2e-53   NTclustered gi|1027029543|ref|XR_001677161.1| 645134 g31179 i0 89.714 40.505016722408 175 17 58 1 1 174 3911 4085 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11002), rRNA blastn 12111 222 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
13436871 13436871 PRJNA700095_P_NODE_19571_length_400_cov_4.498471_g18308_i0 PRJNA700095 19571 400 4.498471 17.993884 Chytridiales sp. JEL116 355340 Fungi Fungi 176 2.18e-39   NTclustered gi|82398613|gb|DQ273833.1| 355340 g18308 i0 75.55 59.6025 409 72 100 20 1 400 1929 1540 Chytridiales sp. JEL116 isolate AFTOL-ID 1533 28S ribosomal RNA gene, partial sequence blastn 23841 176 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales     Chytridiales sp. JEL116
19036036 19036036 PRJNA700095_P_NODE_58915_length_245_cov_1.651163_g57651_i0 PRJNA700095 58915 245 1.651163 4.04534935 Rhizophlyctis 64515 Fungi Fungi 364 2.5e-96   NTclustered gi|166178803|gb|EU379173.1| 64517 g57651 i0 93.522 95.5102040816327 247 12 100 4 1 245 161 405 Rhizophlyctis rosea isolate BR453 28S ribosomal RNA gene, partial sequence blastn 23400 364 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;