RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA699078" and tax_superkingdom = "Viruses"

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tax_kingdom 2

tax_superkingdom 1

  • Viruses · 8 ✖

bioproject 1

  • PRJNA699078 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4510310 4510310 PRJNA699078_S_NODE_44604_length_258_cov_0.995215_g43655_i0 PRJNA699078 44604 258 0.995215 2.5676547 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.023   NTclustered gi|2054750052|tpg|BK043400.1| 2832643 g43655 i0 100 0.108527131782946 28 0 11 0 22 49 82488 82461 MAG TPA_asm: Caudoviricetes sp. isolate ctfkL17, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
7061301 7061301 PRJNA699078_S_NODE_75586_length_193_cov_3.138889_g74637_i0 PRJNA699078 75586 193 3.138889 6.05805577 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.001   NTclustered gi|1995060321|gb|MN450069.1| 12164 g74637 i0 100 0.735751295336788 30 0 16 0 164 193 42 13 Carnation latent virus isolate KL, complete genome blastn 142 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
7061439 7061439 PRJNA699078_S_NODE_83906_length_183_cov_1.410448_g82957_i0 PRJNA699078 83906 183 1.410448 2.58111984 Jujube closterovirus 1 3043313 Viruses Viruses 56.5 0.001   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g82957 i0 94.595 0.355191256830601 37 1 20 1 1 36 6 42 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 65 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
8335308 8335308 PRJNA699078_S_NODE_36027_length_288_cov_2.899582_g35078_i0 PRJNA699078 36027 288 2.899582 8.35079616 Dolerus tritici iflavirus 1 3350209 Viruses Viruses 58.4 5.73e-4   NTclustered gi|2833733277|gb|PQ323359.2| 3350209 g35078 i0 92.683 0.4375 41 2 14 1 248 288 95 56 Dolerus tritici iflavirus 1 isolate HN-WS polyprotein gene, complete cds blastn 126 58.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae Iflavirus Dolerus tritici iflavirus 1
15212670 15212670 PRJNA699078_S_NODE_38432_length_279_cov_1.547826_g37483_i0 PRJNA699078 38432 279 1.547826 4.31843454 Cyvirus 3044698 Viruses Viruses 56.5 0.002   NTclustered gi|2905000374|gb|PQ738159.1| 317878 g37483 i0 100 1.82795698924731 30 0 11 0 54 83 3733 3762 Cyprinid herpesvirus 2 isolate NL-1, complete genome blastn 510 56.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Alloherpesviridae Cyvirus Cyvirus cyprinidallo2
15984999 15984999 PRJNA699078_S_NODE_49973_length_242_cov_1.564767_g49024_i0 PRJNA699078 49973 242 1.564767 3.78673614 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g49024 i0 100 0.582644628099174 29 0 12 0 214 242 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
22359643 22359643 PRJNA699078_S_NODE_57658_length_224_cov_1.005714_g56709_i0 PRJNA699078 57658 224 1.005714 2.25279936 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.006   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g56709 i0 100 0.254464285714286 29 0 13 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
23634595 23634595 PRJNA699078_S_NODE_102079_length_166_cov_0.888889_g101130_i0 PRJNA699078 102079 166 0.888889 1.47555574 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.014   NTclustered gi|2057010275|tpg|BK048666.1| 2832643 g101130 i0 100 0.168674698795181 28 0 17 0 98 125 889 862 MAG TPA_asm: Caudoviricetes sp. isolate ctBAK7, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;