RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA699078" and tax_phylum = "Nemertea"

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tax_superkingdom 1

tax_phylum 1

  • Nemertea · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA699078 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1958063 1958063 PRJNA699078_S_NODE_31702_length_306_cov_3.447471_g30753_i0 PRJNA699078 31702 306 3.447471 10.54926126 Lineus longissimus 88925 Nemertea other_Eukaryota 132 3.56e-26   NTclustered gi|2724582486|ref|XM_064770035.1| 88925 g30753 i0 94.186 26.5718954248366 86 5 28 0 12 97 7762 7677 PREDICTED: Lineus longissimus ELAV-like protein 3 (LOC135486888), transcript variant X8, mRNA blastn 8131 132 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
8335307 8335307 PRJNA699078_S_NODE_36007_length_288_cov_3.334728_g35058_i0 PRJNA699078 36007 288 3.334728 9.60401664 Lineus longissimus 88925 Nemertea other_Eukaryota 62.1 4.43e-5   NTclustered gi|2724555645|ref|XM_064791204.1| 88925 g35058 i0 88.462 0.902777777777778 52 5 18 1 23 73 5730 5679 PREDICTED: Lineus longissimus insulin-like growth factor 2 mRNA-binding protein 2 (LOC135500063), transcript variant X2, mRNA blastn 260 62.1 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
12161410 12161410 PRJNA699078_S_NODE_44010_length_259_cov_7.523810_g43061_i0 PRJNA699078 44010 259 7.52381 19.4866679 Lineus longissimus 88925 Nemertea other_Eukaryota 198 2.8599999999999998e-46   NTclustered gi|2724556262|ref|XM_064791539.1| 88925 g43061 i0 90.132 61.5830115830116 152 15 59 0 1 152 1615 1766 PREDICTED: Lineus longissimus tubulin alpha-1A chain (LOC135500234), transcript variant X3, mRNA blastn 15950 198 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
17260549 17260549 PRJNA699078_S_NODE_7054_length_543_cov_13.775304_g6199_i0 PRJNA699078 7054 543 13.775304 74.79990072 Lineus longissimus 88925 Nemertea other_Eukaryota 442 2.7099999999999985e-119   NTclustered gi|2724578110|ref|XM_064767660.1| 88925 g6199 i0 83.579 85.572744014733 475 75 87 3 30 503 88 560 PREDICTED: Lineus longissimus ubiquitin-ribosomal protein eS31 fusion protein (LOC135485543), mRNA blastn 46466 442 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
24908359 24908359 PRJNA699078_S_NODE_30640_length_311_cov_3.194656_g29691_i0 PRJNA699078 30640 311 3.194656 9.93538016 Lineus longissimus 88925 Nemertea other_Eukaryota 158 5.9899999999999985e-34   NTclustered gi|2724561749|ref|XM_064794450.1| 88925 g29691 i0 83.432 2.77170418006431 169 28 54 0 141 309 1404 1236 PREDICTED: Lineus longissimus NADH-ubiquinone oxidoreductase 49 kDa subunit-like (LOC135502014), mRNA blastn 862 158 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;