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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA699078" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA699078 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3233759 3233759 PRJNA699078_S_NODE_78583_length_189_cov_3.071429_g77634_i0 PRJNA699078 78583 189 3.071429 5.80500081 Acanthaster planci 133434 Echinodermata other_Eukaryota 63.9 7.49e-6   NTclustered gi|1229186445|ref|XM_022251296.1| 133434 g77634 i0 82.432 0.783068783068783 74 11 39 2 113 185 995 923 PREDICTED: Acanthaster planci delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like (LOC110988065), transcript variant X2, mRNA blastn 148 63.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
5012393 5012393 PRJNA699078_S_NODE_38924_length_277_cov_2.175439_g37975_i0 PRJNA699078 38924 277 2.175439 6.02596603 Valvatida 41166 Echinodermata other_Eukaryota 222 1.84e-53   NTclustered gi|1944827247|ref|XM_038209516.1| 46514 g37975 i0 82.375 18.3646209386282 261 40 93 3 1 258 411 668 PREDICTED: Patiria miniata structural maintenance of chromosomes protein 3-like (LOC119735678), mRNA blastn 5087 222 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
5786050 5786050 PRJNA699078_S_NODE_65285_length_209_cov_1.375000_g64336_i0 PRJNA699078 65285 209 1.375 2.87375 Anneissia japonica 1529436 Echinodermata other_Eukaryota 95.3 3e-15   NTclustered gi|1826618869|ref|XM_033242417.1| 1529436 g64336 i0 95 1.86602870813397 60 3 29 0 57 116 261 320 PREDICTED: Anneissia japonica dolichyl-phosphate beta-glucosyltransferase-like (LOC117102198), transcript variant X2, mRNA blastn 390 95.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
7561986 7561986 PRJNA699078_S_NODE_34946_length_292_cov_18.341564_g33997_i0 PRJNA699078 34946 292 18.341564 53.55736688 Metazoa 33208 Echinodermata other_Eukaryota 89.8 2.06e-13   NTclustered gi|322366561|gb|HM449818.1| 7656 g33997 i0 90 4.68150684931507 70 6 24 1 1 70 1252 1320 Paracentrotus lividus beta-tubulin mRNA, partial cds blastn 1367 89.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Echinidae Paracentrotus Paracentrotus lividus
8336111 8336111 PRJNA699078_S_NODE_88127_length_178_cov_1.705426_g87178_i0 PRJNA699078 88127 178 1.705426 3.03565828 Hemicentrotus pulcherrimus 7650 Echinodermata other_Eukaryota 63.9 6.96e-6   NTclustered gi|1276317365|dbj|LC275143.1| 7650 g87178 i0 97.368 1.02247191011236 38 0 21 1 18 54 5771 5734 Hemicentrotus pulcherrimus H4, H2B, H3, H2A, H1 genes for early histone H4, early histone H2B, early histone H3, early histone H2A, early histone H1, partial and complete cds blastn 182 63.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Hemicentrotus Hemicentrotus pulcherrimus
8336152 8336152 PRJNA699078_S_NODE_90887_length_175_cov_1.746032_g89938_i0 PRJNA699078 90887 175 1.746032 3.055556 Lytechinus pictus 7653 Echinodermata other_Eukaryota 126 8.56e-25   NTclustered gi|2707392286|ref|XM_064101025.1| 7653 g89938 i0 82.313 10.6742857142857 147 24 83 2 3 148 250 395 PREDICTED: Lytechinus pictus U1 small nuclear ribonucleoprotein A-like (LOC129263757), transcript variant X2, mRNA blastn 1868 126 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
19809608 19809608 PRJNA699078_S_NODE_74156_length_195_cov_3.308219_g73207_i0 PRJNA699078 74156 195 3.308219 6.45102705 Paracentrotus lividus 7656 Echinodermata other_Eukaryota 102 1.65e-17   NTclustered gi|322366561|gb|HM449818.1| 7656 g73207 i0 91.892 12.7692307692308 74 5 38 1 1 74 1248 1320 Paracentrotus lividus beta-tubulin mRNA, partial cds blastn 2490 102 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Echinidae Paracentrotus Paracentrotus lividus
24908462 24908462 PRJNA699078_S_NODE_37140_length_284_cov_1.774468_g36191_i0 PRJNA699078 37140 284 1.774468 5.03948912 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 58.4 5.64e-4   NTclustered gi|1752381937|ref|XM_030994157.1| 7668 g36191 i0 90.909 0.154929577464789 44 3 15 1 237 279 1083 1126 PREDICTED: Strongylocentrotus purpuratus cylicin-2 (LOC753846), mRNA blastn 44 58.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;