RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA699078" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA699078 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3233021 3233021 PRJNA699078_S_NODE_31083_length_309_cov_2.826923_g30134_i0 PRJNA699078 31083 309 2.826923 8.73519207 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 158 5.939999999999999e-34   NTclustered gi|471218831|ref|XM_004023902.1| 5932 g30134 i0 80.465 1.042071197411 215 34 68 8 72 282 230 20 Ichthyophthirius multifiliis hypothetical protein (IMG5_202480) mRNA, complete cds blastn 322 158 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
3233068 3233068 PRJNA699078_S_NODE_34243_length_296_cov_0.886640_g33294_i0 PRJNA699078 34243 296 0.88664 2.6244544 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.008   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g33294 i0 100 0.192567567567568 29 0 10 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
8335524 8335524 PRJNA699078_S_NODE_49607_length_243_cov_1.587629_g48658_i0 PRJNA699078 49607 243 1.587629 3.85793847 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g48658 i0 100 0.234567901234568 29 0 12 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
9610601 9610601 PRJNA699078_S_NODE_36708_length_286_cov_0.877637_g35759_i0 PRJNA699078 36708 286 0.877637 2.51004182 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g35759 i0 100 0.199300699300699 29 0 10 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
12160973 12160973 PRJNA699078_S_NODE_12930_length_438_cov_4.452442_g12001_i0 PRJNA699078 12930 438 4.452442 19.50169596 Boveria subcylindrica 693871 SAR_Eukaryotes SAR_Eukaryotes 359 2.23e-94   NTclustered gi|759083259|gb|KM221954.1| 693871 g12001 i0 83.333 53.8013698630137 390 63 89 2 37 425 437 49 Boveria subcylindrica voucher FXP2009030301 alpha-tubulin gene, partial cds blastn 23565 359 1 Eukaryota Sar   Ciliophora Oligohymenophorea Thigmotrichida Hemispeiridae Boveria Boveria subcylindrica
23635406 23635406 PRJNA699078_S_NODE_57879_length_223_cov_1.833333_g56930_i0 PRJNA699078 57879 223 1.833333 4.08833259 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g56930 i0 100 0.130044843049327 29 0 13 0 1 29 11 39 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;