RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA699078" and tax_phylum = "Brachiopoda"

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tax_superkingdom 1

tax_phylum 1

  • Brachiopoda · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA699078 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3232892 3232892 PRJNA699078_S_NODE_21443_length_363_cov_9.996815_g20494_i0 PRJNA699078 21443 363 9.996815 36.28843845 Lingula anatina 7574 Brachiopoda other_Eukaryota 171 9.11e-38   NTclustered gi|1351419113|ref|XM_013561912.2| 7574 g20494 i0 85.714 0.523415977961432 161 23 44 0 203 363 549 389 PREDICTED: Lingula anatina ER membrane protein complex subunit 3-like (LOC106178644), mRNA blastn 190 171 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
7061453 7061453 PRJNA699078_S_NODE_8466_length_508_cov_4.847495_g7573_i0 PRJNA699078 8466 508 4.847495 24.6252746 Lingula anatina 7574 Brachiopoda other_Eukaryota 182 6.08e-41   NTclustered gi|919002429|ref|XM_013556880.1| 7574 g7573 i0 82.297 0.858267716535433 209 37 41 0 26 234 600 392 PREDICTED: Lingula anatina condensin complex subunit 2 (LOC106175062), mRNA blastn 436 182 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
9610630 9610630 PRJNA699078_S_NODE_38588_length_278_cov_2.689956_g37639_i0 PRJNA699078 38588 278 2.689956 7.47807768 Lingula anatina 7574 Brachiopoda other_Eukaryota 137 6.87e-28   NTclustered gi|919038512|ref|XM_013547284.1| 7574 g37639 i0 83.553 1.06474820143885 152 19 54 5 110 258 654 506 PREDICTED: Lingula anatina coiled-coil domain-containing protein 173-like (LOC106168274), mRNA blastn 296 137 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;