RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA699078" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA699078 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22359746 22359746 PRJNA699078_S_NODE_63878_length_211_cov_2.950617_g62929_i0 PRJNA699078 63878 211 2.950617 6.22580187 Suillus luteus 5384 Fungi Fungi 54.7 0.005   NTclustered gi|998623171|emb|LN999935.1| 5384 g62929 i0 100 0.137440758293839 29 0 14 0 183 211 31 3 Suillus luteus mRNA for Isocitrate lyase (ICL gene), isolate sp9 blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Suillaceae Suillus Suillus luteus
24908041 24908041 PRJNA699078_S_NODE_106560_length_163_cov_0.912281_g105611_i0 PRJNA699078 106560 163 0.912281 1.48701803 Serpula lacrymans 85982 Fungi Fungi 52.8 0.014   NTclustered gi|597925957|ref|XM_007317261.1| 578457 g105611 i0 100 0.171779141104294 28 0 17 0 71 98 2356 2383 Serpula lacrymans var. lacrymans S7.9 uncharacterized protein (SERLADRAFT_448199), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Serpulaceae Serpula Serpula lacrymans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;