contig_metadata
22 rows where analysis = "blastn", bioproject = "PRJNA699078" and tax_phylum = "Bacillota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 682483 | 682483 | PRJNA699078_S_NODE_55161_length_229_cov_2.094444_g54212_i0 | PRJNA699078 | 55161 | 229 | 2.094444 | 4.79627676 | Planococcus sp. PAMC 21323 | 1526927 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|723610590|gb|CP009129.1| | 1526927 | g54212 | i0 | 100 | 0.248908296943231 | 29 | 0 | 13 | 0 | 36 | 64 | 532866 | 532838 | Planococcus sp. PAMC 21323, complete genome | blastn | 57 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Caryophanaceae | Planococcus | Planococcus sp. PAMC 21323 | ||
| 682915 | 682915 | PRJNA699078_S_NODE_84421_length_182_cov_2.992481_g83472_i0 | PRJNA699078 | 84421 | 182 | 2.992481 | 5.44631542 | Roseburia hominis | 301301 | Bacteria | Bacteria | 209 | 8.68e-50 | NTclustered | gi|1721134209|emb|LR699011.1| | 301301 | g83472 | i0 | 91.503 | 346.675824175824 | 153 | 11 | 84 | 2 | 31 | 182 | 28874 | 29025 | Roseburia hominis isolate MGYG-HGUT-02517 genome assembly, chromosome: 1 | blastn | 63095 | 209 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Roseburia | Roseburia hominis | ||
| 1958253 | 1958253 | PRJNA699078_S_NODE_43902_length_260_cov_1.639810_g42953_i0 | PRJNA699078 | 43902 | 260 | 1.63981 | 4.263506 | uncultured Oscillospiraceae bacterium | 707003 | Bacteria | Bacteria | 292 | 1.28e-74 | NTclustered | gi|2445454856|gb|OQ450232.1| | 707003 | g42953 | i0 | 87.121 | 123.584615384615 | 264 | 27 | 100 | 6 | 1 | 260 | 3646 | 3906 | Uncultured Oscillospiraceae bacterium clone Long_Read_Consensus_CS_F1 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 32132 | 292 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | uncultured Oscillospiraceae bacterium | |||
| 2459334 | 2459334 | PRJNA699078_S_NODE_68022_length_204_cov_3.161290_g67073_i0 | PRJNA699078 | 68022 | 204 | 3.16129 | 6.4490316 | root | 1 | Root_unresolved | Root_unresolved | 329 | 7.34e-86 | NTclustered | gi|1796975023|gb|CP033086.1| | 1280 | g67073 | i0 | 100 | 87.2303921568627 | 178 | 0 | 87 | 0 | 1 | 178 | 2463672 | 2463495 | Staphylococcus aureus strain WH9628 chromosome | blastn | 17795 | 329 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 3233464 | 3233464 | PRJNA699078_S_NODE_60483_length_218_cov_1.319527_g59534_i0 | PRJNA699078 | 60483 | 218 | 1.319527 | 2.87656886 | Streptococcus urinalis | 149016 | Bacteria | Bacteria | 52.8 | 0.019 | NTclustered | gi|1539866814|emb|LR134323.1| | 149016 | g59534 | i0 | 100 | 0.128440366972477 | 28 | 0 | 13 | 0 | 9 | 36 | 558634 | 558661 | Streptococcus urinalis strain NCTC13766 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus urinalis | ||
| 3735921 | 3735921 | PRJNA699078_S_NODE_78343_length_190_cov_1.106383_g77394_i0 | PRJNA699078 | 78343 | 190 | 1.106383 | 2.1021277 | Clostridia | 186801 | Bacteria | Bacteria | 311 | 2.44e-80 | NTclustered | gi|2619698994|gb|CP137821.1| | 29347 | g77394 | i0 | 96.296 | 403.021052631579 | 189 | 7 | 100 | 0 | 2 | 190 | 1915981 | 1916169 | [Clostridium] scindens strain JCM10422 (TH-82) | blastn | 76574 | 313 | 0.993610223642173 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnoclostridium | [Clostridium] scindens | ||
| 5786102 | 5786102 | PRJNA699078_S_NODE_68525_length_204_cov_1.006452_g67576_i0 | PRJNA699078 | 68525 | 204 | 1.006452 | 2.05316208 | Sporosarcina ureae | 1571 | Bacteria | Bacteria | 52.8 | 0.018 | NTclustered | gi|1174585705|gb|CP015109.1| | 1571 | g67576 | i0 | 100 | 0.137254901960784 | 28 | 0 | 14 | 0 | 168 | 195 | 2317968 | 2317941 | Sporosarcina ureae strain P17a chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Caryophanaceae | Sporosarcina | Sporosarcina ureae | ||
| 7562020 | 7562020 | PRJNA699078_S_NODE_96566_length_169_cov_13.400000_g95617_i0 | PRJNA699078 | 96566 | 169 | 13.4 | 22.646 | root | 1 | Root_unresolved | Root_unresolved | 313 | 5.859999999999999e-81 | NTclustered | gi|1796975023|gb|CP033086.1| | 1280 | g95617 | i0 | 100 | 99.1183431952663 | 169 | 0 | 100 | 0 | 1 | 169 | 2463672 | 2463840 | Staphylococcus aureus strain WH9628 chromosome | blastn | 16751 | 313 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 8334787 | 8334787 | PRJNA699078_S_NODE_100627_length_167_cov_0.881356_g99678_i0 | PRJNA699078 | 100627 | 167 | 0.881356 | 1.47186452 | Paenibacillus sp. Cedars | 1980674 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|1394605008|gb|CP020866.1| | 1980674 | g99678 | i0 | 100 | 0.167664670658683 | 28 | 0 | 17 | 0 | 98 | 125 | 5761339 | 5761366 | Paenibacillus sp. Cedars chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus sp. Cedars | ||
| 8335102 | 8335102 | PRJNA699078_S_NODE_23207_length_352_cov_5.009901_g22258_i0 | PRJNA699078 | 23207 | 352 | 5.009901 | 17.63485152 | Clostridium sp. MD294 | 97138 | Bacteria | Bacteria | 540 | 5.82e-149 | NTclustered | gi|2254032980|gb|CP097810.1| | 97138 | g22258 | i0 | 94.602 | 493.326704545455 | 352 | 14 | 100 | 3 | 1 | 352 | 734066 | 734412 | Clostridium sp. MD294 strain ASF356 chromosome, complete genome | blastn | 173651 | 540 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium sp. MD294 | ||
| 8335464 | 8335464 | PRJNA699078_S_NODE_45467_length_255_cov_1.291262_g44518_i0 | PRJNA699078 | 45467 | 255 | 1.291262 | 3.2927181 | Oceanobacillus sp. FSL K6-3682 | 2921503 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|2709943379|gb|CP150263.1| | 2921503 | g44518 | i0 | 100 | 0.109803921568627 | 28 | 0 | 11 | 0 | 130 | 157 | 2011122 | 2011149 | Oceanobacillus sp. FSL K6-3682 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Oceanobacillus | Oceanobacillus sp. FSL K6-3682 | ||
| 12663589 | 12663589 | PRJNA699078_S_NODE_11750_length_453_cov_2.655941_g10830_i0 | PRJNA699078 | 11750 | 453 | 2.655941 | 12.03141273 | Lachnospiraceae | 186803 | Bacteria | Bacteria | 294 | 6.61e-75 | NTclustered | gi|1721134209|emb|LR699011.1| | 301301 | g10830 | i0 | 83.988 | 296.189845474614 | 331 | 28 | 75 | 12 | 24 | 351 | 27667 | 27975 | Roseburia hominis isolate MGYG-HGUT-02517 genome assembly, chromosome: 1 | blastn | 134174 | 296 | 0.993243243243243 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Roseburia | Roseburia hominis | ||
| 12663601 | 12663601 | PRJNA699078_S_NODE_26390_length_333_cov_3.197183_g25441_i0 | PRJNA699078 | 26390 | 333 | 3.197183 | 10.64661939 | Lachnospiraceae | 186803 | Bacteria | Bacteria | 363 | 1.2799999999999999e-95 | NTclustered | gi|2729058667|emb|OZ006967.1| | 3048880 | g25441 | i0 | 87.077 | 403.948948948949 | 325 | 36 | 97 | 6 | 4 | 325 | 643643 | 643322 | MAG: Candidatus Scatomonas sp. isolate 6732_HOM_VAC_s127.ctg000167c_hifiasm_circ MAG genome assembly, chromosome: 1 | blastn | 134515 | 366 | 0.991803278688525 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Candidatus Scatomonas | Candidatus Scatomonas sp. | ||
| 13435662 | 13435662 | PRJNA699078_S_NODE_18491_length_385_cov_1.982143_g17544_i0 | PRJNA699078 | 18491 | 385 | 1.982143 | 7.63125055 | Clostridium sp. MD294 | 97138 | Bacteria | Bacteria | 601 | 2.91e-167 | NTclustered | gi|2254032980|gb|CP097810.1| | 97138 | g17544 | i0 | 95.039 | 383.387012987013 | 383 | 17 | 99 | 2 | 3 | 385 | 962772 | 963152 | Clostridium sp. MD294 strain ASF356 chromosome, complete genome | blastn | 147604 | 601 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium sp. MD294 | ||
| 13436592 | 13436592 | PRJNA699078_S_NODE_82411_length_185_cov_1.147059_g81462_i0 | PRJNA699078 | 82411 | 185 | 1.147059 | 2.12205915 | Clostridium intestinale | 36845 | Bacteria | Bacteria | 58.4 | 3.4e-4 | NTclustered | gi|1880427247|gb|CP059378.1| | 36845 | g81462 | i0 | 97.143 | 0.189189189189189 | 35 | 0 | 19 | 1 | 17 | 51 | 1931226 | 1931193 | Clostridium intestinale strain Lx1 chromosome, complete genome | blastn | 35 | 58.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium intestinale | ||
| 19035918 | 19035918 | PRJNA699078_S_NODE_95395_length_171_cov_1.081967_g94446_i0 | PRJNA699078 | 95395 | 171 | 1.081967 | 1.85016357 | root | 1 | Root_unresolved | Root_unresolved | 54.7 | 0.004 | NTclustered | gi|2579557060|gb|CP134474.1| | 1307 | g94446 | i0 | 100 | 1.69590643274854 | 29 | 0 | 17 | 0 | 141 | 169 | 810328 | 810356 | Streptococcus suis strain PH2016-081 chromosome, complete genome | blastn | 290 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus suis | ||
| 19808589 | 19808589 | PRJNA699078_S_NODE_104516_length_164_cov_1.356522_g103567_i0 | PRJNA699078 | 104516 | 164 | 1.356522 | 2.22469608 | Vescimonas coprocola | 2714355 | Bacteria | Bacteria | 265 | 1.6199999999999998e-66 | NTclustered | gi|2025053910|dbj|AP023418.1| | 2714355 | g103567 | i0 | 95.732 | 294.817073170732 | 164 | 7 | 100 | 0 | 1 | 164 | 257864 | 257701 | Vescimonas coprocola MM50 DNA, complete genome | blastn | 48350 | 265 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Vescimonas | Vescimonas coprocola | ||
| 21084196 | 21084196 | PRJNA699078_S_NODE_13857_length_427_cov_5.960317_g12922_i0 | PRJNA699078 | 13857 | 427 | 5.960317 | 25.45055359 | Clostridium sp. MD294 | 97138 | Bacteria | Bacteria | 667 | 0 | NTclustered | gi|2254032980|gb|CP097810.1| | 97138 | g12922 | i0 | 95.07 | 473.19906323185 | 426 | 17 | 99 | 2 | 1 | 426 | 734900 | 734479 | Clostridium sp. MD294 strain ASF356 chromosome, complete genome | blastn | 202056 | 667 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium sp. MD294 | ||
| 23634598 | 23634598 | PRJNA699078_S_NODE_102219_length_166_cov_0.888889_g101270_i0 | PRJNA699078 | 102219 | 166 | 0.888889 | 1.47555574 | Eubacterium ramulus | 39490 | Bacteria | Bacteria | 200 | 4.69e-47 | NTclustered | gi|2852972075|gb|CP173382.1| | 39490 | g101270 | i0 | 89.375 | 13.644578313253 | 160 | 16 | 96 | 1 | 4 | 162 | 47518 | 47677 | Eubacterium ramulus strain JCM 31335 chromosome, complete genome | blastn | 2265 | 200 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Eubacteriaceae | Eubacterium | Eubacterium ramulus | ||
| 24908109 | 24908109 | PRJNA699078_S_NODE_12960_length_438_cov_2.172237_g12031_i0 | PRJNA699078 | 12960 | 438 | 2.172237 | 9.51439806 | Roseburia sp. 831b | 1261635 | Bacteria | Bacteria | 569 | 9.449999999999999e-158 | NTclustered | gi|2667762819|gb|CP135162.1| | 1261635 | g12031 | i0 | 90.345 | 443.139269406393 | 435 | 41 | 99 | 1 | 1 | 434 | 237422 | 237856 | Roseburia sp. 831b chromosome, complete genome | blastn | 194095 | 569 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Roseburia | Roseburia sp. 831b | ||
| 24908164 | 24908164 | PRJNA699078_S_NODE_17480_length_393_cov_1.982558_g16533_i0 | PRJNA699078 | 17480 | 393 | 1.982558 | 7.79145294 | Hungatella hathewayi | 154046 | Bacteria | Bacteria | 52.8 | 0.038 | NTclustered | gi|2299353445|gb|CP102274.1| | 154046 | g16533 | i0 | 100 | 0.0712468193384224 | 28 | 0 | 7 | 0 | 278 | 305 | 708675 | 708702 | Hungatella hathewayi strain DSM 13479 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Hungatella | Hungatella hathewayi | ||
| 25410664 | 25410664 | PRJNA699078_S_NODE_55740_length_228_cov_1.592179_g54791_i0 | PRJNA699078 | 55740 | 228 | 1.592179 | 3.63016812 | root | 1 | Root_unresolved | Root_unresolved | 399 | 6.299999999999999e-107 | NTclustered | gi|2283119276|gb|CP071933.1| | 1390 | g54791 | i0 | 98.246 | 127.947368421053 | 228 | 4 | 100 | 0 | 1 | 228 | 520 | 747 | Bacillus amyloliquefaciens strain CAS02 plasmid unnamed, complete sequence | blastn | 29172 | 399 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus amyloliquefaciens |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;