contig_metadata
52 rows where analysis = "blastn", bioproject = "PRJNA699078" and tax_kingdom = "Pseudomonadati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 681921 | 681921 | PRJNA699078_S_NODE_18341_length_386_cov_2.824926_g17394_i0 | PRJNA699078 | 18341 | 386 | 2.824926 | 10.90421436 | Parabacteroides distasonis | 823 | Bacteria | Bacteria | 651 | 0 | NTclustered | gi|2463807697|gb|CP120353.1| | 823 | g17394 | i0 | 99.169 | 472.70725388601 | 361 | 3 | 94 | 0 | 26 | 386 | 169328 | 169688 | Parabacteroides distasonis strain F1-28 isolate human Intestinal chromosome, complete genome | blastn | 182465 | 651 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Tannerellaceae | Parabacteroides | Parabacteroides distasonis | |
| 682869 | 682869 | PRJNA699078_S_NODE_80741_length_187_cov_1.130435_g79792_i0 | PRJNA699078 | 80741 | 187 | 1.130435 | 2.11391345 | Parabacteroides distasonis | 823 | Bacteria | Bacteria | 346 | 6.56e-91 | NTclustered | gi|2290784043|gb|CP103242.1| | 823 | g79792 | i0 | 100 | 50.6256684491979 | 187 | 0 | 100 | 0 | 1 | 187 | 3172875 | 3172689 | Parabacteroides distasonis strain BFG-275 chromosome, complete genome | blastn | 9467 | 346 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Tannerellaceae | Parabacteroides | Parabacteroides distasonis | |
| 1184127 | 1184127 | PRJNA699078_S_NODE_57841_length_223_cov_2.022989_g56892_i0 | PRJNA699078 | 57841 | 223 | 2.022989 | 4.51126547 | Parabacteroides | 375288 | Bacteria | Bacteria | 407 | 3.67e-109 | NTclustered | gi|2290514682|gb|CP103099.1| | 823 | g56892 | i0 | 99.552 | 97.4529147982063 | 223 | 1 | 100 | 0 | 1 | 223 | 663341 | 663563 | Parabacteroides distasonis strain BFG-549 chromosome, complete genome | blastn | 21732 | 407 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Tannerellaceae | Parabacteroides | Parabacteroides distasonis | |
| 1184145 | 1184145 | PRJNA699078_S_NODE_99221_length_168_cov_0.873950_g98272_i0 | PRJNA699078 | 99221 | 168 | 0.87395 | 1.468236 | Variovorax | 34072 | Bacteria | Bacteria | 294 | 2.12e-75 | NTclustered | gi|1913357307|gb|CP062121.1| | 2774875 | g98272 | i0 | 98.214 | 16.8392857142857 | 168 | 3 | 100 | 0 | 1 | 168 | 576786 | 576953 | Variovorax sp. 38R chromosome, complete genome | blastn | 2829 | 294 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax sp. 38R | ||
| 1958936 | 1958936 | PRJNA699078_S_NODE_89822_length_176_cov_2.062992_g88873_i0 | PRJNA699078 | 89822 | 176 | 2.062992 | 3.63086592 | Methylorubrum extorquens | 408 | Bacteria | Bacteria | 78.7 | 2.45e-10 | NTclustered | gi|240011718|gb|CP001511.1| | 272630 | g88873 | i0 | 82.796 | 0.528409090909091 | 93 | 10 | 51 | 6 | 42 | 131 | 270939 | 270850 | Methylobacterium extorquens AM1 megaplasmid, complete sequence | blastn | 93 | 78.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylorubrum | Methylorubrum extorquens | ||
| 3232995 | 3232995 | PRJNA699078_S_NODE_29863_length_315_cov_2.548872_g28914_i0 | PRJNA699078 | 29863 | 315 | 2.548872 | 8.0289468 | Delftia acidovorans | 80866 | Bacteria | Bacteria | 52.8 | 0.029 | NTclustered | gi|1943113412|gb|CP065627.1| | 80866 | g28914 | i0 | 100 | 0.0888888888888889 | 28 | 0 | 9 | 0 | 250 | 277 | 3911761 | 3911788 | Delftia acidovorans strain FDAARGOS_939 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Delftia | Delftia acidovorans | ||
| 3233091 | 3233091 | PRJNA699078_S_NODE_36263_length_287_cov_3.289916_g35314_i0 | PRJNA699078 | 36263 | 287 | 3.289916 | 9.44205892 | Sphingopyxis sp. EG6 | 1874061 | Bacteria | Bacteria | 364 | 2.9999999999999993e-96 | NTclustered | gi|1417740650|dbj|AP017603.1| | 1874061 | g35314 | i0 | 91.078 | 0.937282229965157 | 269 | 24 | 94 | 0 | 19 | 287 | 1548932 | 1548664 | Sphingopyxis sp. EG6 DNA, complete genome | blastn | 269 | 364 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingopyxis | Sphingopyxis sp. EG6 | ||
| 3233769 | 3233769 | PRJNA699078_S_NODE_79203_length_189_cov_1.057143_g78254_i0 | PRJNA699078 | 79203 | 189 | 1.057143 | 1.99800027 | Variovorax sp. Varisp41 | 3243033 | Bacteria | Bacteria | 150 | 5.59e-32 | NTclustered | gi|2897244045|gb|CP168540.1| | 3243033 | g78254 | i0 | 88.618 | 0.835978835978836 | 123 | 14 | 65 | 0 | 1 | 123 | 6725647 | 6725769 | Variovorax sp. Varisp41 strain CT11-41 chromosome 1, complete sequence | blastn | 158 | 150 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax sp. Varisp41 | ||
| 3735924 | 3735924 | PRJNA699078_S_NODE_86883_length_180_cov_1.015267_g85934_i0 | PRJNA699078 | 86883 | 180 | 1.015267 | 1.8274806 | Helicobacter | 209 | Bacteria | Bacteria | 327 | 2.2699999999999996e-85 | NTclustered | gi|2157106196|dbj|AP025196.1| | 213 | g85934 | i0 | 99.444 | 136.744444444444 | 180 | 1 | 100 | 0 | 1 | 180 | 137075 | 137254 | Helicobacter cinaedi T36 DNA, complete genome | blastn | 24614 | 327 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter cinaedi | ||
| 5012391 | 5012391 | PRJNA699078_S_NODE_36724_length_285_cov_4.834746_g35775_i0 | PRJNA699078 | 36724 | 285 | 4.834746 | 13.7790261 | Xanthomonas | 338 | Bacteria | Bacteria | 62.1 | 4.37e-5 | NTclustered | gi|2786213386|gb|CP162490.1| | 3160839 | g35775 | i0 | 92.857 | 1.82456140350877 | 42 | 3 | 15 | 0 | 128 | 169 | 658725 | 658766 | Xanthomonas sp. DAR 34887 chromosome, complete genome | blastn | 520 | 62.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Xanthomonas | Xanthomonas tesorieronis | ||
| 5012395 | 5012395 | PRJNA699078_S_NODE_39664_length_274_cov_2.915556_g38715_i0 | PRJNA699078 | 39664 | 274 | 2.915556 | 7.98862344 | Helicobacter | 209 | Bacteria | Bacteria | 507 | 4.47e-139 | NTclustered | gi|50957158|gb|AY596243.1| | 32025 | g38715 | i0 | 100 | 135.956204379562 | 274 | 0 | 100 | 0 | 1 | 274 | 1353 | 1626 | Helicobacter hepaticus strain MIT Hh-2 23S ribosomal RNA gene, partial sequence | blastn | 37252 | 507 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter hepaticus | ||
| 5012403 | 5012403 | PRJNA699078_S_NODE_60684_length_217_cov_3.416667_g59735_i0 | PRJNA699078 | 60684 | 217 | 3.416667 | 7.41416739 | root | 1 | Root_unresolved | Root_unresolved | 401 | 1.6499999999999994e-107 | NTclustered | gi|1848637015|gb|CP054012.1| | 823 | g59735 | i0 | 100 | 142.018433179724 | 217 | 0 | 100 | 0 | 1 | 217 | 2654748 | 2654532 | Parabacteroides distasonis strain FDAARGOS_759 chromosome, complete genome | blastn | 30818 | 401 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Tannerellaceae | Parabacteroides | Parabacteroides distasonis | |
| 5786457 | 5786457 | PRJNA699078_S_NODE_91205_length_175_cov_1.238095_g90256_i0 | PRJNA699078 | 91205 | 175 | 1.238095 | 2.16666625 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 307 | 2.8500000000000004e-79 | NTclustered | gi|2921529653|gb|CP157635.1| | 34073 | g90256 | i0 | 98.286 | 1 | 175 | 3 | 100 | 0 | 1 | 175 | 227 | 401 | Variovorax paradoxus strain 110B chromosome 2, complete sequence | blastn | 175 | 307 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 5786512 | 5786512 | PRJNA699078_S_NODE_95445_length_171_cov_1.008197_g94496_i0 | PRJNA699078 | 95445 | 171 | 1.008197 | 1.72401687 | Burkholderiales bacterium YL45 | 1834205 | Bacteria | Bacteria | 315 | 1.65e-81 | NTclustered | gi|1173528573|gb|CP015403.2| | 1834205 | g94496 | i0 | 100 | 269.315789473684 | 170 | 0 | 99 | 0 | 2 | 171 | 751216 | 751047 | Burkholderiales bacterium YL45 chromosome, complete genome | blastn | 46053 | 315 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales bacterium YL45 | ||||
| 7061358 | 7061358 | PRJNA699078_S_NODE_78906_length_189_cov_1.485714_g77957_i0 | PRJNA699078 | 78906 | 189 | 1.485714 | 2.80799946 | Stappiaceae bacterium | 2952973 | Bacteria | Bacteria | 52.8 | 0.016 | NTclustered | gi|2891482222|emb|OZ219955.1| | 2952973 | g77957 | i0 | 100 | 0.592592592592593 | 28 | 0 | 15 | 0 | 16 | 43 | 59895 | 59868 | MAG: Stappiaceae bacterium isolate 2e4ab203-d541-464b-9f6f-4552e35f8f23 genome assembly, chromosome: 4 | blastn | 112 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Stappiaceae | Stappiaceae bacterium | |||
| 7061637 | 7061637 | PRJNA699078_S_NODE_97886_length_169_cov_0.866667_g96937_i0 | PRJNA699078 | 97886 | 169 | 0.866667 | 1.46466723 | Variovorax sp. PAMC26660 | 2762322 | Bacteria | Bacteria | 263 | 5.989999999999999e-66 | NTclustered | gi|1896689433|gb|CP060295.1| | 2762322 | g96937 | i0 | 94.675 | 47.6272189349112 | 169 | 9 | 100 | 0 | 1 | 169 | 4309482 | 4309314 | Variovorax sp. PAMC26660 chromosome, complete genome | blastn | 8049 | 263 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax sp. PAMC26660 | ||
| 8837026 | 8837026 | PRJNA699078_S_NODE_8187_length_515_cov_2.478541_g7298_i0 | PRJNA699078 | 8187 | 515 | 2.478541 | 12.76448615 | Spirosoma | 107 | Bacteria | Bacteria | 841 | 0 | NTclustered | gi|1702113944|gb|CP041360.1| | 2520506 | g7298 | i0 | 96.117 | 306.256310679612 | 515 | 20 | 100 | 0 | 1 | 515 | 678038 | 677524 | Spirosoma sp. KCTC 42546 chromosome, complete genome | blastn | 157722 | 841 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Cytophagaceae | Spirosoma | Spirosoma sp. KCTC 42546 | |
| 9610781 | 9610781 | PRJNA699078_S_NODE_48868_length_245_cov_1.591837_g47919_i0 | PRJNA699078 | 48868 | 245 | 1.591837 | 3.90000065 | Spirosoma pollinicola | 2057025 | Bacteria | Bacteria | 412 | 8.81e-111 | NTclustered | gi|1304138264|gb|CP025096.1| | 2057025 | g47919 | i0 | 97.154 | 254.70612244898 | 246 | 3 | 100 | 3 | 1 | 245 | 8390585 | 8390827 | Spirosoma pollinicola strain Ha7 chromosome, complete genome | blastn | 62403 | 412 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Cytophagaceae | Spirosoma | Spirosoma pollinicola | |
| 9610873 | 9610873 | PRJNA699078_S_NODE_54408_length_231_cov_1.582418_g53459_i0 | PRJNA699078 | 54408 | 231 | 1.582418 | 3.65538558 | Rhizobium tumorigenes | 2041385 | Bacteria | Bacteria | 309 | 1.11e-79 | NTclustered | gi|2490899830|gb|CP117255.1| | 2041385 | g53459 | i0 | 91.189 | 168.935064935065 | 227 | 20 | 98 | 0 | 1 | 227 | 2665181 | 2665407 | Rhizobium tumorigenes strain 1078 chromosome, complete genome | blastn | 39024 | 309 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Rhizobium | Rhizobium tumorigenes | ||
| 10885882 | 10885882 | PRJNA699078_S_NODE_12709_length_441_cov_3.125000_g11782_i0 | PRJNA699078 | 12709 | 441 | 3.125 | 13.78125 | Phocaeicola dorei | 357276 | Bacteria | Bacteria | 573 | 7.359999999999999e-159 | NTclustered | gi|1721134202|emb|LR699004.1| | 357276 | g11782 | i0 | 93.734 | 422.834467120181 | 383 | 22 | 87 | 2 | 60 | 441 | 695872 | 695491 | Bacteroides dorei isolate MGYG-HGUT-02478 genome assembly, chromosome: 1 | blastn | 186470 | 573 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Phocaeicola | Phocaeicola dorei | |
| 10886645 | 10886645 | PRJNA699078_S_NODE_64929_length_210_cov_0.813665_g63980_i0 | PRJNA699078 | 64929 | 210 | 0.813665 | 1.7086965 | Arachidicoccus terrestris | 2875539 | Bacteria | Bacteria | 270 | 4.6699999999999986e-68 | NTclustered | gi|2096314771|gb|CP083387.1| | 2875539 | g63980 | i0 | 91.089 | 423.666666666667 | 202 | 15 | 96 | 3 | 1 | 201 | 1664870 | 1665069 | Arachidicoccus terrestris strain 5GH13-10 chromosome, complete genome | blastn | 88970 | 270 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Arachidicoccus | Arachidicoccus terrestris | |
| 10886848 | 10886848 | PRJNA699078_S_NODE_78089_length_190_cov_1.602837_g77140_i0 | PRJNA699078 | 78089 | 190 | 1.602837 | 3.0453903 | Spirosoma radiotolerans | 1379870 | Bacteria | Bacteria | 291 | 3.18e-74 | NTclustered | gi|808692684|gb|CP010429.1| | 1379870 | g77140 | i0 | 94.211 | 417.489473684211 | 190 | 11 | 100 | 0 | 1 | 190 | 4385380 | 4385191 | Spirosoma radiotolerans strain DG5A, complete genome | blastn | 79323 | 291 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Cytophagaceae | Spirosoma | Spirosoma radiotolerans | |
| 10887019 | 10887019 | PRJNA699078_S_NODE_89249_length_177_cov_1.375000_g88300_i0 | PRJNA699078 | 89249 | 177 | 1.375 | 2.43375 | Sphingomonas aliaeris | 2759526 | Bacteria | Bacteria | 285 | 1.3499999999999998e-72 | NTclustered | gi|1958866958|gb|CP061037.1| | 2759526 | g88300 | i0 | 96 | 1.92655367231638 | 175 | 7 | 99 | 0 | 1 | 175 | 110612 | 110786 | Sphingomonas aliaeris strain DH-S5 plasmid punnamed2, complete sequence | blastn | 341 | 285 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas aliaeris | ||
| 11387665 | 11387665 | PRJNA699078_S_NODE_19829_length_374_cov_11.027692_g18880_i0 | PRJNA699078 | 19829 | 374 | 11.027692 | 41.24356808 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 640 | 5.969999999999999e-179 | NTclustered | gi|2798691846|gb|CP166923.2| | 301 | g18880 | i0 | 99.713 | 492.708556149733 | 349 | 1 | 93 | 0 | 1 | 349 | 1100307 | 1099959 | Ectopseudomonas oleovorans strain ERA chromosome, complete genome | blastn | 184273 | 645 | 0.992248062015504 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Ectopseudomonas | Ectopseudomonas oleovorans | ||
| 11387674 | 11387674 | PRJNA699078_S_NODE_33049_length_300_cov_3.677291_g32100_i0 | PRJNA699078 | 33049 | 300 | 3.677291 | 11.031873 | Arcobacter | 28196 | Bacteria | Bacteria | 52.8 | 0.028 | NTclustered | gi|1847331607|gb|CP053835.1| | 873191 | g32100 | i0 | 100 | 0.186666666666667 | 28 | 0 | 9 | 0 | 172 | 199 | 2296400 | 2296427 | Arcobacter defluvii strain LMG 25694 chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter defluvii | ||
| 12162005 | 12162005 | PRJNA699078_S_NODE_84090_length_183_cov_1.164179_g83141_i0 | PRJNA699078 | 84090 | 183 | 1.164179 | 2.13044757 | Parabacteroides distasonis | 823 | Bacteria | Bacteria | 339 | 1.07e-88 | NTclustered | gi|2290784043|gb|CP103242.1| | 823 | g83141 | i0 | 100 | 419.765027322404 | 183 | 0 | 100 | 0 | 1 | 183 | 2277104 | 2276922 | Parabacteroides distasonis strain BFG-275 chromosome, complete genome | blastn | 76817 | 339 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Tannerellaceae | Parabacteroides | Parabacteroides distasonis | |
| 12162209 | 12162209 | PRJNA699078_S_NODE_98490_length_168_cov_1.478992_g97541_i0 | PRJNA699078 | 98490 | 168 | 1.478992 | 2.48470656 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|2891482181|emb|OZ219914.1| | 2053615 | g97541 | i0 | 100 | 0.172619047619048 | 29 | 0 | 17 | 0 | 50 | 78 | 2917707 | 2917735 | MAG: Spirochaetia bacterium isolate 65460407-d738-4661-97af-02a88c6845d9 genome assembly, chromosome: 2 | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 12663585 | 12663585 | PRJNA699078_S_NODE_107430_length_162_cov_1.504425_g106481_i0 | PRJNA699078 | 107430 | 162 | 1.504425 | 2.4371685 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 294 | 2.03e-75 | NTclustered | gi|1539751175|emb|LR134290.1| | 300 | g106481 | i0 | 99.383 | 467.746913580247 | 162 | 1 | 100 | 0 | 1 | 162 | 4441585 | 4441424 | Pseudomonas mendocina strain NCTC10897 genome assembly, chromosome: 1 | blastn | 75775 | 294 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Ectopseudomonas | Ectopseudomonas mendocina | ||
| 12663607 | 12663607 | PRJNA699078_S_NODE_3450_length_712_cov_2.457014_g2775_i0 | PRJNA699078 | 3450 | 712 | 2.457014 | 17.49393968 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 1315 | 0 | NTclustered | gi|2588984424|gb|CP135658.1| | 562 | g2775 | i0 | 100 | 687.772471910112 | 712 | 0 | 100 | 0 | 1 | 712 | 1525226 | 1525937 | Escherichia coli strain TUM10008 chromosome, complete genome | blastn | 489694 | 1315 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 12663632 | 12663632 | PRJNA699078_S_NODE_74310_length_195_cov_1.842466_g73361_i0 | PRJNA699078 | 74310 | 195 | 1.842466 | 3.5928087 | root | 1 | Root_unresolved | Root_unresolved | 361 | 2.46e-95 | NTclustered | gi|1370526425|gb|CP027376.1| | 562 | g73361 | i0 | 100 | 336.564102564103 | 195 | 0 | 100 | 0 | 1 | 195 | 2409891 | 2409697 | Escherichia coli strain 2013C-4404 chromosome, complete genome | blastn | 65630 | 361 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 12663643 | 12663643 | PRJNA699078_S_NODE_90790_length_175_cov_2.000000_g89841_i0 | PRJNA699078 | 90790 | 175 | 2 | 3.5 | Variovorax | 34072 | Bacteria | Bacteria | 219 | 1.37e-52 | NTclustered | gi|2741163780|dbj|AP028666.1| | 3065956 | g89841 | i0 | 90.361 | 2.84571428571429 | 166 | 16 | 95 | 0 | 8 | 173 | 6042224 | 6042059 | Variovorax sp. V35 DNA, complete genome | blastn | 498 | 219 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax sp. V35 | ||
| 13436317 | 13436317 | PRJNA699078_S_NODE_62951_length_213_cov_1.609756_g62002_i0 | PRJNA699078 | 62951 | 213 | 1.609756 | 3.42878028 | Vibrio chagasii | 170679 | Bacteria | Bacteria | 52.8 | 0.019 | NTclustered | gi|2271101966|dbj|AP025465.1| | 170679 | g62002 | i0 | 100 | 0.131455399061033 | 28 | 0 | 13 | 0 | 56 | 83 | 2357394 | 2357421 | Vibrio chagasii LMG 21353 DNA, chromosome 1, complete sequence | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio chagasii | ||
| 13938065 | 13938065 | PRJNA699078_S_NODE_73811_length_196_cov_1.312925_g72862_i0 | PRJNA699078 | 73811 | 196 | 1.312925 | 2.573333 | Variovorax | 34072 | Bacteria | Bacteria | 230 | 7.299999999999999e-56 | NTclustered | gi|2189435386|gb|CP091716.1| | 34073 | g72862 | i0 | 89.888 | 22.0612244897959 | 178 | 18 | 91 | 0 | 19 | 196 | 7617977 | 7617800 | Variovorax paradoxus strain IPSP_MA_2 chromosome | blastn | 4324 | 230 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 14711304 | 14711304 | PRJNA699078_S_NODE_4952_length_619_cov_3.233333_g4163_i0 | PRJNA699078 | 4952 | 619 | 3.233333 | 20.01433127 | Parabacteroides distasonis | 823 | Bacteria | Bacteria | 1133 | 0 | NTclustered | gi|2463807697|gb|CP120353.1| | 823 | g4163 | i0 | 99.677 | 552.478190630049 | 619 | 2 | 100 | 0 | 1 | 619 | 2312873 | 2313491 | Parabacteroides distasonis strain F1-28 isolate human Intestinal chromosome, complete genome | blastn | 341984 | 1133 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Tannerellaceae | Parabacteroides | Parabacteroides distasonis | |
| 14711590 | 14711590 | PRJNA699078_S_NODE_68592_length_204_cov_0.903226_g67643_i0 | PRJNA699078 | 68592 | 204 | 0.903226 | 1.84258104 | Variovorax sp. PAMC26660 | 2762322 | Bacteria | Bacteria | 361 | 2.6e-95 | NTclustered | gi|1896689433|gb|CP060295.1| | 2762322 | g67643 | i0 | 98.529 | 46.5343137254902 | 204 | 3 | 100 | 0 | 1 | 204 | 6755371 | 6755574 | Variovorax sp. PAMC26660 chromosome, complete genome | blastn | 9493 | 361 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax sp. PAMC26660 | ||
| 15985007 | 15985007 | PRJNA699078_S_NODE_50733_length_240_cov_1.612565_g49784_i0 | PRJNA699078 | 50733 | 240 | 1.612565 | 3.870156 | Sulfurimonas sp. SWIR-19 | 2878390 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2111132204|gb|CP084578.1| | 2878390 | g49784 | i0 | 100 | 0.116666666666667 | 28 | 0 | 12 | 0 | 196 | 223 | 407469 | 407442 | Sulfurimonas sp. SWIR-19 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfurimonas | Sulfurimonas sp. SWIR-19 | ||
| 15985089 | 15985089 | PRJNA699078_S_NODE_56253_length_227_cov_1.168539_g55304_i0 | PRJNA699078 | 56253 | 227 | 1.168539 | 2.65258353 | Variovorax sp. PAMC26660 | 2762322 | Bacteria | Bacteria | 169 | 1.92e-37 | NTclustered | gi|1896689433|gb|CP060295.1| | 2762322 | g55304 | i0 | 85.625 | 1.06607929515419 | 160 | 23 | 70 | 0 | 67 | 226 | 7152944 | 7153103 | Variovorax sp. PAMC26660 chromosome, complete genome | blastn | 242 | 169 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax sp. PAMC26660 | ||
| 16487043 | 16487043 | PRJNA699078_S_NODE_14773_length_418_cov_1.268293_g13835_i0 | PRJNA699078 | 14773 | 418 | 1.268293 | 5.30146474 | Helicobacter | 209 | Bacteria | Bacteria | 773 | 0 | NTclustered | gi|50957158|gb|AY596243.1| | 32025 | g13835 | i0 | 100 | 128.047846889952 | 418 | 0 | 100 | 0 | 1 | 418 | 1071 | 654 | Helicobacter hepaticus strain MIT Hh-2 23S ribosomal RNA gene, partial sequence | blastn | 53524 | 773 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter hepaticus | ||
| 16487056 | 16487056 | PRJNA699078_S_NODE_47733_length_248_cov_2.115578_g46784_i0 | PRJNA699078 | 47733 | 248 | 2.115578 | 5.24663344 | Bacteroides | 816 | Bacteria | Bacteria | 414 | 2.48e-111 | NTclustered | gi|2290604469|gb|CP103098.1| | 371601 | g46784 | i0 | 96.774 | 429.552419354839 | 248 | 8 | 100 | 0 | 1 | 248 | 5594485 | 5594732 | Bacteroides xylanisolvens strain BFG-319 chromosome, complete genome | blastn | 106529 | 414 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides xylanisolvens | |
| 16487075 | 16487075 | PRJNA699078_S_NODE_97213_length_169_cov_1.250000_g96264_i0 | PRJNA699078 | 97213 | 169 | 1.25 | 2.1125 | Burkholderia | 32008 | Bacteria | Bacteria | 313 | 5.859999999999999e-81 | NTclustered | gi|2090904009|gb|CP082808.1| | 488447 | g96264 | i0 | 100 | 100 | 169 | 0 | 100 | 0 | 1 | 169 | 889038 | 888870 | Burkholderia contaminans strain SCAID TST1-2021 (11/270) chromosome 2, complete sequence | blastn | 16900 | 313 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia contaminans | ||
| 17259547 | 17259547 | PRJNA699078_S_NODE_103514_length_165_cov_0.896552_g102565_i0 | PRJNA699078 | 103514 | 165 | 0.896552 | 1.4793108 | Blattabacterium cuenoti | 1653831 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|1893900755|gb|CP059221.1| | 1653831 | g102565 | i0 | 100 | 0.175757575757576 | 29 | 0 | 18 | 0 | 78 | 106 | 557127 | 557155 | Blattabacterium cuenoti strain ALLACbim chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Blattabacteriaceae | Blattabacterium | Blattabacterium cuenoti | |
| 17260322 | 17260322 | PRJNA699078_S_NODE_55454_length_229_cov_0.988889_g54505_i0 | PRJNA699078 | 55454 | 229 | 0.988889 | 2.26455581 | Helicobacter hepaticus | 32025 | Bacteria | Bacteria | 418 | 1.7499999999999995e-112 | NTclustered | gi|32263428|gb|AE017125.1| | 235279 | g54505 | i0 | 99.563 | 27.4934497816594 | 229 | 1 | 100 | 0 | 1 | 229 | 360251 | 360023 | Helicobacter hepaticus ATCC 51449, complete genome | blastn | 6296 | 418 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter hepaticus | ||
| 17761922 | 17761922 | PRJNA699078_S_NODE_38514_length_278_cov_8.834061_g37565_i0 | PRJNA699078 | 38514 | 278 | 8.834061 | 24.55868958 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 472 | 1.6599999999999998e-128 | NTclustered | gi|2618357005|gb|CP137721.1| | 562 | g37565 | i0 | 100 | 628.197841726619 | 255 | 0 | 92 | 0 | 1 | 255 | 5149719 | 5149973 | Escherichia coli strain HNTH2207 chromosome | blastn | 174639 | 472 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 19035893 | 19035893 | PRJNA699078_S_NODE_33855_length_297_cov_2.096774_g32906_i0 | PRJNA699078 | 33855 | 297 | 2.096774 | 6.22741878 | Turicimonas | 1918598 | Bacteria | Bacteria | 399 | 8.549999999999999e-107 | NTclustered | gi|1957935753|gb|CP065313.1| | 1796652 | g32906 | i0 | 100 | 147.292929292929 | 216 | 0 | 100 | 0 | 1 | 216 | 44040 | 43825 | Turicimonas muris strain YL45 chromosome | blastn | 43746 | 399 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sutterellaceae | Turicimonas | Turicimonas muris | ||
| 19035910 | 19035910 | PRJNA699078_S_NODE_82675_length_184_cov_3.125926_g81726_i0 | PRJNA699078 | 82675 | 184 | 3.125926 | 5.75170384 | Halomonas | 2745 | Bacteria | Bacteria | 52.8 | 0.016 | NTclustered | gi|1036082207|emb|LT593974.1| | 1666906 | g81726 | i0 | 100 | 0.304347826086957 | 28 | 0 | 15 | 0 | 33 | 60 | 2947681 | 2947708 | Halomonas sp. HL-93 genome assembly, chromosome: I | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Halomonadaceae | Halomonas | Halomonas sp. HL-93 | ||
| 19809545 | 19809545 | PRJNA699078_S_NODE_69176_length_203_cov_1.077922_g68227_i0 | PRJNA699078 | 69176 | 203 | 1.077922 | 2.18818166 | Phocaeicola dorei | 357276 | Bacteria | Bacteria | 370 | 4.3e-98 | NTclustered | gi|671709398|gb|CP007619.1| | 357276 | g68227 | i0 | 99.507 | 311.354679802956 | 203 | 1 | 100 | 0 | 1 | 203 | 665694 | 665492 | Bacteroides dorei isolate HS1_L_1_B_010, complete genome | blastn | 63205 | 370 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Phocaeicola | Phocaeicola dorei | |
| 20310451 | 20310451 | PRJNA699078_S_NODE_50136_length_241_cov_9.786458_g49187_i0 | PRJNA699078 | 50136 | 241 | 9.786458 | 23.58536378 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 446 | 8.519999999999999e-121 | NTclustered | gi|2211724983|gb|CP066839.1| | 562 | g49187 | i0 | 100 | 677.788381742739 | 241 | 0 | 100 | 0 | 1 | 241 | 78374 | 78614 | Escherichia coli strain Ec-RL2-1X chromosome, complete genome | blastn | 163347 | 446 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 21084204 | 21084204 | PRJNA699078_S_NODE_14477_length_421_cov_2.384409_g13539_i0 | PRJNA699078 | 14477 | 421 | 2.384409 | 10.03836189 | Alphaproteobacteria bacterium | 1913988 | Bacteria | Bacteria | 472 | 2.63e-128 | NTclustered | gi|2893358410|emb|OZ220701.1| | 1913988 | g13539 | i0 | 89.446 | 177.619952494062 | 379 | 33 | 89 | 7 | 1 | 376 | 2702004 | 2702378 | MAG: Alphaproteobacteria bacterium isolate a603a0a2-d098-4ec7-8fb6-76c879e39c7f genome assembly, chromosome: 1 | blastn | 74778 | 472 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Alphaproteobacteria bacterium | |||||
| 21084511 | 21084511 | PRJNA699078_S_NODE_34497_length_294_cov_5.293878_g33548_i0 | PRJNA699078 | 34497 | 294 | 5.293878 | 15.56400132 | Acinetobacter calcoaceticus | 471 | Bacteria | Bacteria | 52.8 | 0.027 | NTclustered | gi|2591781342|gb|CP130683.1| | 471 | g33548 | i0 | 100 | 0.0952380952380952 | 28 | 0 | 10 | 0 | 254 | 281 | 1812081 | 1812108 | Acinetobacter calcoaceticus strain AC001_UM chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter calcoaceticus | ||
| 22359675 | 22359675 | PRJNA699078_S_NODE_60198_length_218_cov_3.047337_g59249_i0 | PRJNA699078 | 60198 | 218 | 3.047337 | 6.64319466 | Acinetobacter baumannii | 470 | Bacteria | Bacteria | 52.8 | 0.019 | NTclustered | gi|2470454228|gb|CP113071.1| | 470 | g59249 | i0 | 100 | 0.770642201834862 | 28 | 0 | 13 | 0 | 158 | 185 | 2016407 | 2016380 | Acinetobacter baumannii strain A118 DeltaH0N27_10830::kan chromosome, complete genome | blastn | 168 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 23634994 | 23634994 | PRJNA699078_S_NODE_30239_length_313_cov_3.200758_g29290_i0 | PRJNA699078 | 30239 | 313 | 3.200758 | 10.01837254 | Spirosoma radiotolerans | 1379870 | Bacteria | Bacteria | 457 | 5.309999999999999e-124 | NTclustered | gi|808692684|gb|CP010429.1| | 1379870 | g29290 | i0 | 92.971 | 211.690095846645 | 313 | 22 | 100 | 0 | 1 | 313 | 5778787 | 5779099 | Spirosoma radiotolerans strain DG5A, complete genome | blastn | 66259 | 457 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Cytophagaceae | Spirosoma | Spirosoma radiotolerans | |
| 23635854 | 23635854 | PRJNA699078_S_NODE_88759_length_178_cov_0.844961_g87810_i0 | PRJNA699078 | 88759 | 178 | 0.844961 | 1.50403058 | Sodalis praecaptivus | 1239307 | Bacteria | Bacteria | 65.8 | 1.93e-6 | NTclustered | gi|573019581|gb|CP006569.1| | 1239307 | g87810 | i0 | 93.182 | 0.921348314606742 | 44 | 3 | 25 | 0 | 12 | 55 | 648470 | 648427 | Sodalis praecaptivus strain HS1 chromosome, complete genome | blastn | 164 | 65.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Bruguierivoracaceae | Sodalis | Sodalis praecaptivus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;