RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA699078" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 12 ✖

bioproject 1

  • PRJNA699078 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3233021 3233021 PRJNA699078_S_NODE_31083_length_309_cov_2.826923_g30134_i0 PRJNA699078 31083 309 2.826923 8.73519207 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 158 5.939999999999999e-34   NTclustered gi|471218831|ref|XM_004023902.1| 5932 g30134 i0 80.465 1.042071197411 215 34 68 8 72 282 230 20 Ichthyophthirius multifiliis hypothetical protein (IMG5_202480) mRNA, complete cds blastn 322 158 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
3233068 3233068 PRJNA699078_S_NODE_34243_length_296_cov_0.886640_g33294_i0 PRJNA699078 34243 296 0.88664 2.6244544 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.008   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g33294 i0 100 0.192567567567568 29 0 10 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
3735889 3735889 PRJNA699078_S_NODE_17423_length_393_cov_4.860465_g16476_i0 PRJNA699078 17423 393 4.860465 19.10162745 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 82.4 4.79e-11   NTclustered gi|14495562|gb|L21708.2|PFA34K 5821 g16476 i0 94.34 3.70737913486005 53 3 13 0 273 325 112 60 Plasmodium berghei p23-like protein mRNA, partial cds blastn 1457 82.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
5012416 5012416 PRJNA699078_S_NODE_93404_length_173_cov_1.064516_g92455_i0 PRJNA699078 93404 173 1.064516 1.84161268 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.015   NTclustered gi|2795616734|ref|XM_068062397.1| 483139 g92455 i0 100 1.29479768786127 28 0 16 0 103 130 2080 2107 Cystoisospora suis uba ts-n domain-containing protein (CSUI_002195), mRNA blastn 224 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
8335524 8335524 PRJNA699078_S_NODE_49607_length_243_cov_1.587629_g48658_i0 PRJNA699078 49607 243 1.587629 3.85793847 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g48658 i0 100 0.234567901234568 29 0 12 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
9610601 9610601 PRJNA699078_S_NODE_36708_length_286_cov_0.877637_g35759_i0 PRJNA699078 36708 286 0.877637 2.51004182 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g35759 i0 100 0.199300699300699 29 0 10 0 1 29 9 37 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
10887138 10887138 PRJNA699078_S_NODE_98169_length_168_cov_2.184874_g97220_i0 PRJNA699078 98169 168 2.184874 3.67058832 Haplosporidium littoralis 1296328 SAR_Eukaryotes SAR_Eukaryotes 97.1 6.43e-16   NTclustered gi|605052145|gb|KJ150289.1| 1296328 g97220 i0 86.17 1.94642857142857 94 8 55 4 1 92 4013 4103 Haplosporidium littoralis small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 327 97.1 1 Eukaryota Sar   Endomyxa Ascetosporea Haplosporida Haplosporidiidae Haplosporidium Haplosporidium littoralis
11387673 11387673 PRJNA699078_S_NODE_32889_length_301_cov_2.345238_g31940_i0 PRJNA699078 32889 301 2.345238 7.05916638 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.028   NTclustered gi|2695621|gb|U82548.1|PFU82548 5833 g31940 i0 100 0.186046511627907 28 0 9 0 266 293 1695 1668 Plasmodium falciparum asparagine-rich protein gene, partial cds blastn 56 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
12160973 12160973 PRJNA699078_S_NODE_12930_length_438_cov_4.452442_g12001_i0 PRJNA699078 12930 438 4.452442 19.50169596 Boveria subcylindrica 693871 SAR_Eukaryotes SAR_Eukaryotes 359 2.23e-94   NTclustered gi|759083259|gb|KM221954.1| 693871 g12001 i0 83.333 53.8013698630137 390 63 89 2 37 425 437 49 Boveria subcylindrica voucher FXP2009030301 alpha-tubulin gene, partial cds blastn 23565 359 1 Eukaryota Sar   Ciliophora Oligohymenophorea Thigmotrichida Hemispeiridae Boveria Boveria subcylindrica
15212654 15212654 PRJNA699078_S_NODE_100892_length_167_cov_0.881356_g99943_i0 PRJNA699078 100892 167 0.881356 1.47186452 root 1 Root_unresolved Root_unresolved 100 4.93e-17   NTclustered gi|1419234739|dbj|AP018511.1| 303400 g99943 i0 84.848 27.9041916167665 99 15 59 0 1 99 98858 98760 Nitzschia palea NIES-2729 chloroplast DNA complet genome blastn 4660 100 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia palea
19809231 19809231 PRJNA699078_S_NODE_48696_length_245_cov_3.474490_g47747_i0 PRJNA699078 48696 245 3.47449 8.5125005 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 152 2.12e-32   NTclustered gi|813141452|ref|XM_012343573.1| 695850 g47747 i0 78.632 31.3387755102041 234 47 96 2 8 241 686 456 Saprolegnia parasitica CBS 223.65 60S ribosomal protein L8 mRNA blastn 7678 152 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
23635406 23635406 PRJNA699078_S_NODE_57879_length_223_cov_1.833333_g56930_i0 PRJNA699078 57879 223 1.833333 4.08833259 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g56930 i0 100 0.130044843049327 29 0 13 0 1 29 11 39 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 29 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;