contig_metadata
22 rows where analysis = "blastn", bioproject = "PRJNA698538" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 681512 | 681512 | PRJNA698538_S_NODE_26121_length_253_cov_2.994444_g25955_i0 | PRJNA698538 | 26121 | 253 | 2.994444 | 7.57594332 | Actinomycetospora sp. NBC_00405 | 2975952 | Bacteria | Bacteria | 307 | 4.44e-79 | NTclustered | gi|2658591327|gb|CP107938.1| | 2975952 | g25955 | i0 | 88.538 | 62.5691699604743 | 253 | 29 | 100 | 0 | 1 | 253 | 1350259 | 1350511 | Actinomycetospora sp. NBC_00405 chromosome, complete genome | blastn | 15830 | 307 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Actinomycetospora | Actinomycetospora sp. NBC_00405 | ||
| 4509263 | 4509263 | PRJNA698538_S_NODE_12364_length_330_cov_4.400778_g12198_i0 | PRJNA698538 | 12364 | 330 | 4.400778 | 14.5225674 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 577 | 4.15e-160 | NTclustered | gi|1723592958|emb|LR584267.1| | 1528099 | g12198 | i0 | 98.182 | 346.987878787879 | 330 | 6 | 100 | 0 | 1 | 330 | 553488 | 553159 | Lawsonella clevelandensis isolate USB-603019 genome assembly, chromosome: 1 | blastn | 114506 | 577 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 5012336 | 5012336 | PRJNA698538_S_NODE_17824_length_295_cov_3.918919_g17658_i0 | PRJNA698538 | 17824 | 295 | 3.918919 | 11.56081105 | Corynebacterium | 1716 | Bacteria | Bacteria | 534 | 2.23e-147 | NTclustered | gi|507148198|ref|NR_103005.1| | 1727 | g17658 | i0 | 99.324 | 367.898305084746 | 296 | 1 | 100 | 1 | 1 | 295 | 527 | 232 | Corynebacterium variabile strain DSM 44702 23S ribosomal RNA gene, complete sequence | blastn | 108530 | 534 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium variabile | ||
| 5012372 | 5012372 | PRJNA698538_S_NODE_8864_length_360_cov_2.222997_g8698_i0 | PRJNA698538 | 8864 | 360 | 2.222997 | 8.0027892 | Microbacterium | 33882 | Bacteria | Bacteria | 643 | 4.429999999999998e-180 | NTclustered | gi|2274432258|gb|CP101471.1| | 33918 | g8698 | i0 | 98.889 | 172 | 360 | 4 | 100 | 0 | 1 | 360 | 230625 | 230984 | Microbacterium maritypicum strain DND4 chromosome, complete genome | blastn | 61920 | 643 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium maritypicum | ||
| 9609864 | 9609864 | PRJNA698538_S_NODE_24848_length_259_cov_1.795699_g24682_i0 | PRJNA698538 | 24848 | 259 | 1.795699 | 4.65086041 | Neoactinobaculum massilliense | 2364794 | Bacteria | Bacteria | 479 | 9.13e-131 | NTclustered | gi|2363082511|ref|NR_179502.1| | 2364794 | g24682 | i0 | 100 | 111.397683397683 | 259 | 0 | 100 | 0 | 1 | 259 | 1420 | 1162 | Neoactinobaculum massilliense strain Marseille-P6182 16S ribosomal RNA, partial sequence | blastn | 28852 | 479 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Neoactinobaculum | Neoactinobaculum massilliense | ||
| 9609953 | 9609953 | PRJNA698538_S_NODE_30568_length_237_cov_2.304878_g30402_i0 | PRJNA698538 | 30568 | 237 | 2.304878 | 5.46256086 | Corynebacterium macginleyi | 38290 | Bacteria | Bacteria | 424 | 3.91e-114 | NTclustered | gi|1980278327|gb|CP068292.1| | 38290 | g30402 | i0 | 98.745 | 363.658227848101 | 239 | 1 | 100 | 2 | 1 | 237 | 1287242 | 1287004 | Corynebacterium macginleyi strain 160811 chromosome, complete genome | blastn | 86187 | 424 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium macginleyi | ||
| 10112678 | 10112678 | PRJNA698538_S_NODE_31628_length_226_cov_3.921569_g31462_i0 | PRJNA698538 | 31628 | 226 | 3.921569 | 8.86274594 | Micrococcus | 1269 | Bacteria | Bacteria | 412 | 8.01e-111 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g31462 | i0 | 99.558 | 344.787610619469 | 226 | 1 | 100 | 0 | 1 | 226 | 346132 | 346357 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 77922 | 412 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 10885517 | 10885517 | PRJNA698538_S_NODE_26129_length_253_cov_2.844444_g25963_i0 | PRJNA698538 | 26129 | 253 | 2.844444 | 7.19644332 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 451 | 1.94e-122 | NTclustered | gi|1723592958|emb|LR584267.1| | 1528099 | g25963 | i0 | 98.814 | 460.150197628458 | 253 | 3 | 100 | 0 | 1 | 253 | 553461 | 553209 | Lawsonella clevelandensis isolate USB-603019 genome assembly, chromosome: 1 | blastn | 116418 | 451 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 11387625 | 11387625 | PRJNA698538_S_NODE_19389_length_286_cov_4.211268_g19223_i0 | PRJNA698538 | 19389 | 286 | 4.211268 | 12.04422648 | Cutibacterium | 1912216 | Bacteria | Bacteria | 529 | 1e-145 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g19223 | i0 | 100 | 55.2937062937063 | 286 | 0 | 100 | 0 | 1 | 286 | 2511690 | 2511405 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 15814 | 529 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 12663550 | 12663550 | PRJNA698538_S_NODE_150_length_1299_cov_15.435563_g80_i0 | PRJNA698538 | 150 | 1299 | 15.435563 | 200.50796337 | Cutibacterium | 1912216 | Bacteria | Bacteria | 2316 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g80 | i0 | 99.92 | 246.390300230947 | 1257 | 1 | 98 | 0 | 21 | 1277 | 55349 | 56605 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 320061 | 2316 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 12663553 | 12663553 | PRJNA698538_S_NODE_17590_length_297_cov_1.718750_g17424_i0 | PRJNA698538 | 17590 | 297 | 1.71875 | 5.1046875 | Cutibacterium | 1912216 | Bacteria | Bacteria | 549 | 8.029999999999997e-152 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g17424 | i0 | 100 | 51.03367003367 | 297 | 0 | 100 | 0 | 1 | 297 | 1350667 | 1350963 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 15157 | 549 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 13435075 | 13435075 | PRJNA698538_S_NODE_12131_length_332_cov_3.343629_g11965_i0 | PRJNA698538 | 12131 | 332 | 3.343629 | 11.10084828 | Microbacterium sp. RG1 | 2489212 | Bacteria | Bacteria | 86.1 | 3.08e-12 | NTclustered | gi|1646963381|gb|CP034121.1| | 2489212 | g11965 | i0 | 90.769 | 13.7620481927711 | 65 | 4 | 20 | 2 | 1 | 65 | 1675576 | 1675638 | Microbacterium sp. RG1 chromosome, complete genome | blastn | 4569 | 86.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium sp. RG1 | ||
| 13435137 | 13435137 | PRJNA698538_S_NODE_16651_length_302_cov_5.043668_g16485_i0 | PRJNA698538 | 16651 | 302 | 5.043668 | 15.23187736 | Nocardioides sp. NBC_00850 | 2976001 | Bacteria | Bacteria | 52.8 | 0.028 | NTclustered | gi|2655527585|gb|CP108845.1| | 2976001 | g16485 | i0 | 100 | 0.0927152317880795 | 28 | 0 | 9 | 0 | 171 | 198 | 3242163 | 3242136 | Nocardioides sp. NBC_00850 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides sp. NBC_00850 | ||
| 13938001 | 13938001 | PRJNA698538_S_NODE_23791_length_264_cov_1.785340_g23625_i0 | PRJNA698538 | 23791 | 264 | 1.78534 | 4.7132976 | Cutibacterium | 1912216 | Bacteria | Bacteria | 488 | 1.5499999999999999e-133 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g23625 | i0 | 100 | 49.3295454545455 | 264 | 0 | 100 | 0 | 1 | 264 | 1642542 | 1642279 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 13023 | 488 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 17259283 | 17259283 | PRJNA698538_S_NODE_23934_length_263_cov_2.836842_g23768_i0 | PRJNA698538 | 23934 | 263 | 2.836842 | 7.46089446 | Kocuria palustris | 71999 | Bacteria | Bacteria | 481 | 2.58e-131 | NTclustered | gi|923033569|gb|CP012507.1| | 71999 | g23768 | i0 | 99.62 | 258.665399239544 | 263 | 1 | 100 | 0 | 1 | 263 | 218746 | 218484 | Kocuria palustris strain MU14/1, complete genome | blastn | 68029 | 481 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Kocuria | Kocuria palustris | ||
| 20310376 | 20310376 | PRJNA698538_S_NODE_10556_length_345_cov_0.875000_g10390_i0 | PRJNA698538 | 10556 | 345 | 0.875 | 3.01875 | Cutibacterium | 1912216 | Bacteria | Bacteria | 638 | 1.97e-178 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g10390 | i0 | 100 | 60.0289855072464 | 345 | 0 | 100 | 0 | 1 | 345 | 2552978 | 2552634 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 20710 | 638 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 21083933 | 21083933 | PRJNA698538_S_NODE_4437_length_424_cov_1.410256_g4271_i0 | PRJNA698538 | 4437 | 424 | 1.410256 | 5.97948544 | Streptomyces vietnamensis | 362257 | Bacteria | Bacteria | 52.8 | 0.041 | NTclustered | gi|751387084|gb|CP010407.1| | 362257 | g4271 | i0 | 100 | 0.0660377358490566 | 28 | 0 | 7 | 0 | 40 | 67 | 997583 | 997610 | Streptomyces vietnamensis strain GIM4.0001, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces vietnamensis | ||
| 21586329 | 21586329 | PRJNA698538_S_NODE_6037_length_394_cov_2.457944_g5871_i0 | PRJNA698538 | 6037 | 394 | 2.457944 | 9.68429936 | Cutibacterium | 1912216 | Bacteria | Bacteria | 667 | 0 | NTclustered | gi|1755605466|dbj|AP019664.1| | 1747 | g5871 | i0 | 100 | 82.1167512690355 | 361 | 0 | 92 | 0 | 34 | 394 | 2130915 | 2130555 | Cutibacterium acnes TP-CU389 DNA, complete genome | blastn | 32354 | 667 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 22861575 | 22861575 | PRJNA698538_S_NODE_8178_length_367_cov_3.115646_g8012_i0 | PRJNA698538 | 8178 | 367 | 3.115646 | 11.43442082 | Cutibacterium | 1912216 | Bacteria | Bacteria | 673 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g8012 | i0 | 99.728 | 51.0108991825613 | 367 | 1 | 100 | 0 | 1 | 367 | 896950 | 897316 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 18721 | 673 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 23634559 | 23634559 | PRJNA698538_S_NODE_999_length_650_cov_5.755633_g843_i0 | PRJNA698538 | 999 | 650 | 5.7556330000000004 | 37.4116145 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 1162 | 0 | NTclustered | gi|1723592958|emb|LR584267.1| | 1528099 | g843 | i0 | 98.923 | 363.069230769231 | 650 | 7 | 100 | 0 | 1 | 650 | 553189 | 552540 | Lawsonella clevelandensis isolate USB-603019 genome assembly, chromosome: 1 | blastn | 235995 | 1162 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 24135779 | 24135779 | PRJNA698538_S_NODE_13239_length_324_cov_2.844622_g13073_i0 | PRJNA698538 | 13239 | 324 | 2.844622 | 9.21657528 | Cutibacterium | 1912216 | Bacteria | Bacteria | 599 | 8.67e-167 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g13073 | i0 | 100 | 31.7098765432099 | 324 | 0 | 100 | 0 | 1 | 324 | 421358 | 421681 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 10274 | 599 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 24907713 | 24907713 | PRJNA698538_S_NODE_22940_length_268_cov_2.682051_g22774_i0 | PRJNA698538 | 22940 | 268 | 2.682051 | 7.18789668 | Mycobacterium branderi | 43348 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|1806425038|dbj|AP022607.1| | 43348 | g22774 | i0 | 100 | 0.104477611940299 | 28 | 0 | 10 | 0 | 212 | 239 | 311638 | 311611 | Mycobacterium branderi JCM 12687 plasmid pJCM12687 DNA, nearly complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium branderi |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;