RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA698538" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 9 ✖

bioproject 1

  • PRJNA698538 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
681266 681266 PRJNA698538_S_NODE_10521_length_345_cov_1.981618_g10355_i0 PRJNA698538 10521 345 1.981618 6.8365821 Tobamovirus tabaci 3432891 Viruses Viruses 627 4.259999999999999e-175   NTclustered gi|388240233|emb|HE818437.1| 12242 g10355 i0 99.422 100.226086956522 346 0 100 2 1 345 5622 5966 Tobacco mosaic virus isolate Mangshi-2, complete genome blastn 34578 627 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
4509503 4509503 PRJNA698538_S_NODE_28244_length_246_cov_1.780347_g28078_i0 PRJNA698538 28244 246 1.780347 4.37965362 Pestivirus bovis 3052619 Viruses Viruses 427 3.16e-115   NTclustered gi|507866684|gb|KC695810.1| 11099 g28078 i0 97.967 7.36585365853659 246 5 100 0 1 246 4040 4285 Bovine viral diarrhea virus 1 isolate camel-6, complete genome blastn 1812 427 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Pestivirus Pestivirus bovis
5784754 5784754 PRJNA698538_S_NODE_15245_length_311_cov_2.226891_g15079_i0 PRJNA698538 15245 311 2.226891 6.92563101 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.008   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g15079 i0 92.308 0.215434083601286 39 1 13 2 1 39 13 49 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 67 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
8334389 8334389 PRJNA698538_S_NODE_11667_length_336_cov_1.376426_g11501_i0 PRJNA698538 11667 336 1.376426 4.62479136 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.009   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g11501 i0 100 0.169642857142857 29 0 9 0 308 336 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
8334479 8334479 PRJNA698538_S_NODE_18627_length_291_cov_1.298165_g18461_i0 PRJNA698538 18627 291 1.298165 3.77766015 Guangdong tick orbivirus 2998222 Viruses Viruses 54.7 0.007   NTclustered gi|2374021761|gb|OM264154.1| 2998222 g18461 i0 100 0.292096219931271 29 0 10 0 258 286 1913 1941 Guangdong tick orbivirus strain GD-2020 capping enzyme (VP4) gene, complete cds blastn 85 54.7 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Orbivirus Guangdong tick orbivirus
13435346 13435346 PRJNA698538_S_NODE_31951_length_217_cov_112.055556_g31785_i0 PRJNA698538 31951 217 112.055556 243.16055652 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.005   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g31785 i0 100 0.262672811059908 29 0 13 0 1 29 6 34 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
21083816 21083816 PRJNA698538_S_NODE_25437_length_256_cov_3.437158_g25271_i0 PRJNA698538 25437 256 3.437158 8.79912448 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 344 3.43e-90   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g25271 i0 90.625 1 256 24 100 0 1 256 6759 7014 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 256 344 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
22358778 22358778 PRJNA698538_S_NODE_9358_length_355_cov_3.996454_g9192_i0 PRJNA698538 9358 355 3.996454 14.1874117 Skokie dicistro-like virus 2789443 Viruses Viruses 573 5.799999999999999e-159   NTclustered gi|1935607033|gb|MT747992.1| 2789443 g9192 i0 95.775 1 355 15 100 0 1 355 2942 3296 Skokie dicistro-like virus strain USAdf-2 polyprotein 1 and polyprotein 2 genes, complete cds blastn 355 573 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Skokie dicistro-like virus
24907894 24907894 PRJNA698538_S_NODE_5740_length_398_cov_10.098462_g5574_i0 PRJNA698538 5740 398 10.098462 40.19187876 Zebrafish picornavirus 1 2304617 Viruses Viruses 695 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g5574 i0 98.241 4.25376884422111 398 6 100 1 1 398 7832 8228 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 1693 695 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;