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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA698538" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 7 ✖

bioproject 1

  • PRJNA698538 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3232469 3232469 PRJNA698538_S_NODE_29583_length_242_cov_1.958580_g29417_i0 PRJNA698538 29583 242 1.95858 4.7397636 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 372 1.47e-98   NTclustered gi|221185864|gb|FJ577811.1| 590481 g29417 i0 94.672 68.7644628099174 244 6 98 6 1 238 959 717 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 16641 372 1 Eukaryota Amoebozoa             uncultured Amoebozoa
3232473 3232473 PRJNA698538_S_NODE_29863_length_241_cov_4.547619_g29697_i0 PRJNA698538 29863 241 4.547619 10.95976179 Endolimax nana 110788 Evosea other_Eukaryota 178 3.43e-40   NTclustered gi|6625685|gb|AF149916.1|AF149916 110788 g29697 i0 86.503 50.7302904564315 163 20 67 2 1 162 2428 2589 Endolimax nana 16S-like small subunit ribosomal RNA gene, complete sequence blastn 12226 178 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Endolimax Endolimax nana
7059850 7059850 PRJNA698538_S_NODE_14926_length_313_cov_1.866667_g14760_i0 PRJNA698538 14926 313 1.866667 5.84266771 Korotnevella jeppesenii 1678066 Discosea other_Eukaryota 556 5.09e-154   NTclustered gi|861553759|gb|KP719186.1| 1678066 g14760 i0 98.726 78.8083067092652 314 2 100 2 1 313 137 449 Korotnevella jeppesenii strain A4DVDPB clone 4 small subunit ribosomal RNA gene, partial sequence blastn 24667 556 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Korotnevella Korotnevella jeppesenii
7561934 7561934 PRJNA698538_S_NODE_16706_length_302_cov_2.598253_g16540_i0 PRJNA698538 16706 302 2.598253 7.84672406 Endolimax 110787 Evosea other_Eukaryota 159 1.61e-34   NTclustered gi|443299289|gb|JX101954.1| 1284676 g16540 i0 95.05 23.8576158940397 101 5 47 0 1 101 2104 2004 Endolimax piscium clone PM1 18S ribosomal RNA gene, partial sequence blastn 7205 159 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Endolimax Endolimax piscium
10885373 10885373 PRJNA698538_S_NODE_17389_length_298_cov_2.053333_g17223_i0 PRJNA698538 17389 298 2.053333 6.11893234 Endolimax piscium 1284676 Evosea other_Eukaryota 110 1.62e-19   NTclustered gi|443299289|gb|JX101954.1| 1284676 g17223 i0 98.387 4.22147651006711 62 1 21 0 237 298 1005 944 Endolimax piscium clone PM1 18S ribosomal RNA gene, partial sequence blastn 1258 110 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Endolimax Endolimax piscium
12663567 12663567 PRJNA698538_S_NODE_25410_length_256_cov_6.306011_g25244_i0 PRJNA698538 25410 256 6.306011 16.14338816 Endolimax 110787 Evosea other_Eukaryota 219 2.1699999999999993e-52   NTclustered gi|443299289|gb|JX101954.1| 1284676 g25244 i0 95 41.15625 140 6 78 1 118 256 2788 2927 Endolimax piscium clone PM1 18S ribosomal RNA gene, partial sequence blastn 10536 219 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Endolimax Endolimax piscium
13435229 13435229 PRJNA698538_S_NODE_23031_length_268_cov_1.302564_g22865_i0 PRJNA698538 23031 268 1.302564 3.49087152 Fuligo septica 159720 Evosea other_Eukaryota 496 9.429999999999999e-136   NTclustered gi|381139265|emb|HE655082.1| 159720 g22865 i0 100 68.4589552238806 268 0 100 0 1 268 1806 2073 Fuligo septica partial 28S rRNA gene, isolate IW-1 blastn 18347 496 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;