RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA695273" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA695273 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1954496 1954496 PRJNA695273_P_NODE_59322_length_355_cov_1.464539_g58564_i0 PRJNA695273 59322 355 1.464539 5.19911345 Margelopsis haeckelii 2876032 Cnidaria other_Eukaryota 300 1.09e-76   NTclustered gi|2095489123|gb|OK142735.1| 2876032 g58564 i0 82.123 100.633802816901 358 56 100 8 1 355 943 1295 Margelopsis haeckelii strain Ost2019 large subunit ribosomal RNA gene, partial sequence blastn 35725 300 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Margelopsidae Margelopsis Margelopsis haeckelii
2458766 2458766 PRJNA695273_P_NODE_91762_length_289_cov_1.199074_g91004_i0 PRJNA695273 91762 289 1.199074 3.46532386 Metazoa 33208 Cnidaria other_Eukaryota 52.8 0.027   NTclustered gi|2917940701|emb|OZ237558.1| 6108 g91004 i0 96.774 0.806228373702422 31 1 11 0 105 135 11052293 11052323 Anemonia sulcata genome assembly, chromosome: 4 blastn 233 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;