RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA695273" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA695273 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8330246 8330246 PRJNA695273_P_NODE_13947_length_774_cov_1.763195_g13230_i0 PRJNA695273 13947 774 1.763195 13.6471293 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 60.2 4.64e-4   NTclustered gi|2874254139|emb|OY970224.1| 171953 g13230 i0 97.143 0.0452196382428941 35 1 5 0 681 715 3318393 3318359 MAG: uncultured Acidobacteriota bacterium isolate MFD04967.bin.c.6 genome assembly, chromosome: 1 blastn 35 60.2 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
10880445 10880445 PRJNA695273_P_NODE_111629_length_266_cov_2.393782_g110871_i0 PRJNA695273 111629 266 2.393782 6.36746012 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 124 5.0799999999999996e-24   NTclustered gi|2874253980|emb|OY970305.1| 194844 g110871 i0 91.209 3.84962406015038 91 8 34 0 157 247 168137 168227 MAG: uncultured Acidobacteriaceae bacterium isolate MFD03726.bin.c.10 genome assembly, chromosome: 1 blastn 1024 124 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
19803244 19803244 PRJNA695273_P_NODE_109256_length_269_cov_1.571429_g108498_i0 PRJNA695273 109256 269 1.571429 4.22714401 Luteitalea sp. TBR-22 2802971 Bacteria Bacteria 152 2.36e-32   NTclustered gi|2131947417|dbj|AP024452.2| 2802971 g108498 i0 78.189 5.64684014869888 243 49 90 4 4 244 5896760 5896520 Vicinamibacteria bacterium TBR-22 DNA, complete genome blastn 1519 152 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales Vicinamibacteraceae Luteitalea Luteitalea sp. TBR-22

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;