RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA695273" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 11 ✖

bioproject 1

  • PRJNA695273 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
678348 678348 PRJNA695273_P_NODE_501_length_6502_cov_12.065173_g370_i0 PRJNA695273 501 6502 12.065173 784.47754846 Red mite associated cystovirus 2936548 Viruses Viruses 11960 0   NTclustered gi|2239998150|gb|ON160022.1| 2936548 g370 i0 100 1.89557059366349 6476 0 99 0 23 6498 6476 1 Red mite associated cystovirus isolate RMACTV1-L P14, P15, P7, P2, P4, and P1 genes, complete cds blastn 12325 11960 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus
3229886 3229886 PRJNA695273_P_NODE_75663_length_317_cov_1.934426_g74905_i0 PRJNA695273 75663 317 1.934426 6.13213042 Alphacoronavirus porci 3433789 Viruses Viruses 586 6.579999999999998e-163   NTclustered gi|1884653818|gb|MT090145.1| 28295 g74905 i0 100 100 317 0 100 0 1 317 25578 25262 Porcine epidemic diarrhea virus strain CH/HNYY/2018, complete genome blastn 31700 586 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Alphacoronavirus Alphacoronavirus porci
5010412 5010412 PRJNA695273_P_NODE_142144_length_246_cov_0.890173_g141386_i0 PRJNA695273 142144 246 0.890173 2.18982558 Paramyxoviridae 11158 Viruses Viruses 455 1.4500000000000002e-123   NTclustered gi|2721617856|gb|PP711545.1| 251774 g141386 i0 100 69 246 0 100 0 1 246 2445 2200 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 16974 455 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
6286593 6286593 PRJNA695273_P_NODE_29405_length_505_cov_2.125000_g28648_i0 PRJNA695273 29405 505 2.125 10.73125 Orthorubulavirus 2560195 Viruses Viruses 928 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g28648 i0 99.802 68.9465346534653 505 1 100 0 1 505 3839 4343 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 34818 933 0.994640943193998 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
10110284 10110284 PRJNA695273_P_NODE_10188_length_931_cov_2.420746_g9521_i0 PRJNA695273 10188 931 2.420746 22.53714526 Orthorubulavirus 2560195 Viruses Viruses 1714 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g9521 i0 99.893 80.2749731471536 931 1 100 0 1 931 42 972 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 74736 1714 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
10111397 10111397 PRJNA695273_P_NODE_39748_length_430_cov_2.599440_g38990_i0 PRJNA695273 39748 430 2.59944 11.177592 Paramyxoviridae 11158 Viruses Viruses 771 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g38990 i0 99.068 82.8 429 4 99 0 2 430 1233 805 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 35604 776 0.993556701030928 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
11386059 11386059 PRJNA695273_P_NODE_24509_length_560_cov_2.671458_g23757_i0 PRJNA695273 24509 560 2.671458 14.9601648 Paramyxoviridae 11158 Viruses Viruses 1035 0   NTclustered gi|146351838|gb|EF543648.1| 149595 g23757 i0 100 71.6410714285714 560 0 100 0 1 560 1060 1619 Canine parainfluenza virus strain FA nucleocapsid (N) gene, complete cds blastn 40119 1035 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae   Canine parainfluenza virus
15211270 15211270 PRJNA695273_P_NODE_35352_length_457_cov_2.671875_g34594_i0 PRJNA695273 35352 457 2.671875 12.21046875 Paramyxoviridae 11158 Viruses Viruses 833 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g34594 i0 99.562 85.7177242888403 457 2 100 0 1 457 1901 1445 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 39173 839 0.99284862932062 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
18530884 18530884 PRJNA695273_P_NODE_815_length_4335_cov_41.987799_g624_i0 PRJNA695273 815 4335 41.987799 1820.17108665 Pseudomonas phage ER16 2917704 Viruses Viruses 99 5.73e-15   NTclustered gi|2209092821|gb|OM650249.1| 2917704 g624 i0 87.5 0.0202998846597463 88 8 2 3 27 114 72 156 Pseudomonas phage ER16 segment M, complete sequence blastn 88 99 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae   Pseudomonas phage ER16
20308934 20308934 PRJNA695273_P_NODE_28316_length_516_cov_1.618510_g27560_i0 PRJNA695273 28316 516 1.61851 8.3515116 Paramyxoviridae 11158 Viruses Viruses 952 0   NTclustered gi|134039021|gb|EF487542.1| 149595 g27560 i0 100 97.7790697674419 515 0 99 0 2 516 1129 615 Canine parainfluenza virus strain FA fusion protein (F) gene, complete cds blastn 50454 952 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae   Canine parainfluenza virus
24903975 24903975 PRJNA695273_P_NODE_1880_length_2354_cov_165.429636_g1570_i0 PRJNA695273 1880 2354 165.429636 3894.21363144 Red mite associated cystovirus 2936548 Viruses Viruses 4344 0   NTclustered gi|2239998157|gb|ON160023.1| 2936548 g1570 i0 100 1.67119796091759 2352 0 99 0 3 2354 2352 1 Red mite associated cystovirus isolate RMACTV1-S P8, P12, P9, and P5 genes, complete cds blastn 3934 4344 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;