contig_metadata
17 rows where analysis = "blastn", bioproject = "PRJNA695273" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 679384 | 679384 | PRJNA695273_P_NODE_98101_length_282_cov_1.172249_g97343_i0 | PRJNA695273 | 98101 | 282 | 1.172249 | 3.30574218 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 516 | 7.67e-142 | NTclustered | gi|1208657894|gb|CP021934.1| | 76857 | g97343 | i0 | 99.645 | 99.8617021276596 | 282 | 1 | 100 | 0 | 1 | 282 | 569555 | 569836 | Fusobacterium nucleatum subsp. polymorphum strain KCOM 1260 (=ChDC F218) genome | blastn | 28161 | 516 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 1952843 | 1952843 | PRJNA695273_P_NODE_129862_length_250_cov_0.870056_g129104_i0 | PRJNA695273 | 129862 | 250 | 0.870056 | 2.17514 | Sneathia sanguinegens | 40543 | Bacteria | Bacteria | 435 | 1.92e-117 | NTclustered | gi|2769805188|gb|CP160095.1| | 40543 | g129104 | i0 | 98 | 1 | 250 | 5 | 100 | 0 | 1 | 250 | 1185324 | 1185075 | Sneathia sanguinegens strain CCUG 41628T chromosome, complete genome | blastn | 250 | 435 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sneathia | Sneathia sanguinegens | ||
| 3227184 | 3227184 | PRJNA695273_P_NODE_102103_length_277_cov_1.764706_g101345_i0 | PRJNA695273 | 102103 | 277 | 1.764706 | 4.88823562 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 422 | 1.69e-113 | NTclustered | gi|1708575239|dbj|AP019834.1| | 157687 | g101345 | i0 | 95.455 | 12.7617328519856 | 264 | 12 | 95 | 0 | 14 | 277 | 1596315 | 1596578 | Leptotrichia wadei JMUB3933 DNA, complete genome | blastn | 3535 | 422 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 3229107 | 3229107 | PRJNA695273_P_NODE_40543_length_426_cov_1.759207_g39785_i0 | PRJNA695273 | 40543 | 426 | 1.759207 | 7.49422182 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 761 | 0 | NTclustered | gi|1276718681|gb|CP024704.1| | 2663009 | g39785 | i0 | 99.287 | 482.821596244131 | 421 | 3 | 99 | 0 | 6 | 426 | 14325 | 13905 | Fusobacterium pseudoperiodonticum strain KCOM 2555 chromosome, complete genome | blastn | 205682 | 761 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 3734126 | 3734126 | PRJNA695273_P_NODE_161403_length_241_cov_0.863095_g160645_i0 | PRJNA695273 | 161403 | 241 | 0.863095 | 2.08005895 | Leptotrichia | 32067 | Bacteria | Bacteria | 429 | 8.58e-116 | NTclustered | gi|33860342|gb|AY349385.1| | 242674 | g160645 | i0 | 98.755 | 103.697095435685 | 241 | 3 | 100 | 0 | 1 | 241 | 279 | 39 | Leptotrichia sp. oral clone GT020 16S ribosomal RNA gene, partial sequence | blastn | 24991 | 429 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral clone GT020 | ||
| 4505681 | 4505681 | PRJNA695273_P_NODE_160944_length_241_cov_0.916667_g160186_i0 | PRJNA695273 | 160944 | 241 | 0.916667 | 2.20916747 | uncultured Fusobacteriota bacterium | 174329 | Bacteria | Bacteria | 424 | 3.99e-114 | NTclustered | gi|401555839|gb|JX010890.1| | 174329 | g160186 | i0 | 98.34 | 100.016597510373 | 241 | 4 | 100 | 0 | 1 | 241 | 282 | 42 | Uncultured Fusobacteria bacterium clone 9H3 16S ribosomal RNA gene, partial sequence | blastn | 24104 | 424 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | uncultured Fusobacteriota bacterium | ||||||
| 5010384 | 5010384 | PRJNA695273_P_NODE_140564_length_247_cov_0.885057_g139806_i0 | PRJNA695273 | 140564 | 247 | 0.885057 | 2.18609079 | Fusobacterium | 848 | Bacteria | Bacteria | 344 | 3.29e-90 | NTclustered | gi|2921414533|gb|CP159325.1| | 851 | g139806 | i0 | 91.87 | 99.497975708502 | 246 | 20 | 99 | 0 | 1 | 246 | 88162 | 88407 | Fusobacterium nucleatum strain CTI-2 chromosome, complete genome | blastn | 24576 | 344 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 5011005 | 5011005 | PRJNA695273_P_NODE_3824_length_1586_cov_3.795770_g3387_i0 | PRJNA695273 | 3824 | 1586 | 3.79577 | 60.2009122 | Leptotrichia | 32067 | Bacteria | Bacteria | 2699 | 0 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g3387 | i0 | 97.357 | 455.353089533417 | 1589 | 39 | 100 | 3 | 1 | 1586 | 2257359 | 2255771 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 722190 | 2699 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 5781757 | 5781757 | PRJNA695273_P_NODE_49605_length_386_cov_0.977636_g48847_i0 | PRJNA695273 | 49605 | 386 | 0.977636 | 3.77367496 | Pseudoleptotrichia goodfellowii | 157692 | Bacteria | Bacteria | 58.4 | 7.92e-4 | NTclustered | gi|1708563796|dbj|AP019822.1| | 157692 | g48847 | i0 | 100 | 0.0803108808290155 | 31 | 0 | 8 | 0 | 353 | 383 | 902590 | 902560 | Leptotrichia goodfellowii JCM16774 DNA, complete genome | blastn | 31 | 58.4 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Pseudoleptotrichia | Pseudoleptotrichia goodfellowii | ||
| 9605672 | 9605672 | PRJNA695273_P_NODE_146068_length_245_cov_0.895349_g145310_i0 | PRJNA695273 | 146068 | 245 | 0.895349 | 2.19360505 | Leptotrichia alba | 3239304 | Bacteria | Bacteria | 350 | 7e-92 | NTclustered | gi|2785244533|gb|CP165647.1| | 3239304 | g145310 | i0 | 93.469 | 1 | 245 | 1 | 100 | 1 | 1 | 245 | 1939529 | 1939758 | Leptotrichia sp. HSP-536 chromosome, complete genome | blastn | 245 | 350 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia alba | ||
| 12156354 | 12156354 | PRJNA695273_P_NODE_143350_length_246_cov_0.890173_g142592_i0 | PRJNA695273 | 143350 | 246 | 0.890173 | 2.18982558 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 449 | 6.74e-122 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g142592 | i0 | 99.593 | 16.0121951219512 | 246 | 1 | 100 | 0 | 1 | 246 | 395870 | 396115 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 3939 | 449 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 17255056 | 17255056 | PRJNA695273_P_NODE_142834_length_246_cov_0.890173_g142076_i0 | PRJNA695273 | 142834 | 246 | 0.890173 | 2.18982558 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|1708575239|dbj|AP019834.1| | 157687 | g142076 | i0 | 100 | 3 | 246 | 0 | 100 | 0 | 1 | 246 | 1945532 | 1945287 | Leptotrichia wadei JMUB3933 DNA, complete genome | blastn | 738 | 455 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 19804839 | 19804839 | PRJNA695273_P_NODE_34456_length_464_cov_1.061381_g33698_i0 | PRJNA695273 | 34456 | 464 | 1.061381 | 4.92480784 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 846 | 0 | NTclustered | gi|2706433495|gb|CP077153.1| | 76857 | g33698 | i0 | 99.569 | 435.446120689655 | 464 | 2 | 100 | 0 | 1 | 464 | 1978967 | 1979430 | Fusobacterium polymorphum strain KCOM1274 chromosome, complete genome | blastn | 202047 | 846 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 20309066 | 20309066 | PRJNA695273_P_NODE_35896_length_453_cov_2.918421_g35138_i0 | PRJNA695273 | 35896 | 453 | 2.918421 | 13.22044713 | Fusobacterium | 848 | Bacteria | Bacteria | 832 | 0 | NTclustered | gi|1370537877|gb|CP028108.1| | 860 | g35138 | i0 | 99.779 | 476.366445916115 | 453 | 1 | 100 | 0 | 1 | 453 | 462638 | 462186 | Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome | blastn | 215794 | 837 | 0.994026284348865 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum | ||
| 22354122 | 22354122 | PRJNA695273_P_NODE_125798_length_251_cov_0.865169_g125040_i0 | PRJNA695273 | 125798 | 251 | 0.865169 | 2.17157419 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 431 | 2.4999999999999996e-116 | NTclustered | gi|1276705688|gb|CP024698.1| | 2663009 | g125040 | i0 | 97.619 | 12.0239043824701 | 252 | 4 | 100 | 2 | 1 | 251 | 685113 | 685363 | Fusobacterium pseudoperiodonticum strain KCOM 1283 chromosome, complete genome | blastn | 3018 | 431 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 22354611 | 22354611 | PRJNA695273_P_NODE_147078_length_245_cov_0.895349_g146320_i0 | PRJNA695273 | 147078 | 245 | 0.895349 | 2.19360505 | Leptotrichia shahii | 157691 | Bacteria | Bacteria | 448 | 2.41e-121 | NTclustered | gi|1708568515|dbj|AP019827.1| | 157691 | g146320 | i0 | 99.592 | 3 | 245 | 1 | 100 | 0 | 1 | 245 | 1713482 | 1713726 | Leptotrichia shahii JCM16776 DNA, complete genome | blastn | 735 | 448 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia shahii | ||
| 24902588 | 24902588 | PRJNA695273_P_NODE_105460_length_273_cov_2.560000_g104702_i0 | PRJNA695273 | 105460 | 273 | 2.56 | 6.9888 | Leptotrichia hofstadii | 157688 | Bacteria | Bacteria | 494 | 3.46e-135 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g104702 | i0 | 99.267 | 142.531135531136 | 273 | 2 | 100 | 0 | 1 | 273 | 2374903 | 2374631 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 38911 | 494 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;