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contig_metadata

27 rows where analysis = "blastn", bioproject = "PRJNA695273" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 27 ✖

bioproject 1

  • PRJNA695273 · 27 ✖

analysis 1

  • blastn · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
676727 676727 PRJNA695273_P_NODE_124301_length_251_cov_2.269663_g123543_i0 PRJNA695273 124301 251 2.269663 5.69685413 Vannella sp. ECH30 1215635 Discosea other_Eukaryota 442 1.1599999999999995e-119   NTclustered gi|399764220|gb|JQ271731.1| 1215635 g123543 i0 98.406 87.8247011952191 251 4 100 0 1 251 665 915 Vannella sp. ECH30 18S ribosomal RNA gene, partial sequence blastn 22044 442 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ECH30
1953621 1953621 PRJNA695273_P_NODE_163342_length_202_cov_5.217054_g162584_i0 PRJNA695273 163342 202 5.217054 10.53844908 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 274 3.45e-69   NTclustered gi|300078498|gb|GU001160.1| 5755 g162584 i0 90.741 20.7128712871287 216 4 99 12 1 201 6250 6464 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4184 274 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1954985 1954985 PRJNA695273_P_NODE_81782_length_305_cov_3.198276_g81024_i0 PRJNA695273 81782 305 3.198276 9.7547418 Echinostelium minutum 300235 Evosea other_Eukaryota 189 2.08e-43   NTclustered gi|293601664|gb|AY643814.2| 300235 g81024 i0 80.228 79.6786885245902 263 42 85 8 1 258 1840 2097 Echinostelium minutum strain ATCC 22345 elongation factor 1A (EF1A) gene, partial cds blastn 24302 189 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Echinosteliales Echinosteliidae Echinostelium Echinostelium minutum
4507177 4507177 PRJNA695273_P_NODE_87304_length_295_cov_3.391892_g86546_i0 PRJNA695273 87304 295 3.391892 10.0060814 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 195 4.3e-45   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g86546 i0 79.927 16.0169491525424 274 48 91 7 9 277 272 1 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 4725 195 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5779926 5779926 PRJNA695273_P_NODE_111565_length_267_cov_0.881443_g110807_i0 PRJNA695273 111565 267 0.881443 2.35345281 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 457 4.43e-124   NTclustered gi|399764262|gb|JQ271773.1| 1105345 g110807 i0 97.407 65.752808988764 270 3 99 3 1 266 1716 1985 Vexillifera bacillipedes strain P20Z 18S ribosomal RNA gene, partial sequence blastn 17556 457 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
5780181 5780181 PRJNA695273_P_NODE_122565_length_254_cov_1.060773_g121807_i0 PRJNA695273 122565 254 1.060773 2.69436342 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 54.7 0.006   NTclustered gi|470512462|ref|XM_004352440.1| 1257118 g121807 i0 100 0.114173228346457 29 0 11 0 76 104 686 714 Acanthamoeba castellanii str. Neff 3' exoribonuclease family, domain 1 domain containing protein (ACA1_360300), partial mRNA blastn 29 54.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5781866 5781866 PRJNA695273_P_NODE_54305_length_370_cov_1.531987_g53547_i0 PRJNA695273 54305 370 1.531987 5.6683519 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 326 1.88e-84   NTclustered gi|423292048|gb|JQ519470.1| 5778 g53547 i0 94.737 75.3945945945946 209 11 56 0 1 209 700 908 Vermamoeba vermiformis clone JG10.132_b5 alpha tubulin gene, partial cds blastn 27896 326 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
7056218 7056218 PRJNA695273_P_NODE_16266_length_707_cov_14.717666_g15529_i0 PRJNA695273 16266 707 14.717666 104.05389862 uncultured Rhizamoeba 1260765 Tubulinea other_Eukaryota 357 1.34e-93   NTclustered gi|511487963|gb|JX898537.1| 1260765 g15529 i0 80.658 33.2545968882603 486 72 68 21 74 551 1 472 Uncultured Rhizamoeba clone HCA_D03-34 28S ribosomal RNA gene, partial sequence blastn 23511 357 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae   uncultured Rhizamoeba
7057109 7057109 PRJNA695273_P_NODE_59326_length_355_cov_1.450355_g58568_i0 PRJNA695273 59326 355 1.450355 5.14876025 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 496 1.29e-135   NTclustered gi|292559443|ref|NC_013986.1| 5778 g58568 i0 92.733 93.312676056338 344 24 97 1 13 355 28294 27951 Hartmannella vermiformis mitochondrion, complete genome blastn 33126 496 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
8331053 8331053 PRJNA695273_P_NODE_29367_length_505_cov_9.442130_g28610_i0 PRJNA695273 29367 505 9.44213 47.682756500000004 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 736 0   NTclustered gi|300078498|gb|GU001160.1| 5755 g28610 i0 92.939 8.95841584158416 524 8 100 17 1 505 5413 5926 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4524 736 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9606029 9606029 PRJNA695273_P_NODE_161268_length_241_cov_0.916667_g160510_i0 PRJNA695273 161268 241 0.916667 2.20916747 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 446 8.519999999999999e-121   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g160510 i0 100 70.2821576763485 241 0 100 0 1 241 941 1181 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 16938 446 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
10881977 10881977 PRJNA695273_P_NODE_31389_length_487_cov_2.729469_g30631_i0 PRJNA695273 31389 487 2.729469 13.29251403 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 795 0   NTclustered gi|62910949|gb|AY925001.1| 5778 g30631 i0 96.099 3.56262833675565 487 19 100 0 1 487 557 71 Hartmannella vermiformis Rpl7A mRNA, partial cds blastn 1735 795 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
11385896 11385896 PRJNA695273_P_NODE_161989_length_235_cov_9.475309_g161231_i0 PRJNA695273 161989 235 9.475309 22.26697615 Vermamoeba 1260114 Tubulinea other_Eukaryota 433 6.44e-117   NTclustered gi|300078496|gb|GU001158.1| 5778 g161231 i0 100 50.8170212765957 234 0 99 0 1 234 2663 2896 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11942 433 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
11387209 11387209 PRJNA695273_P_NODE_98349_length_281_cov_5.572115_g97591_i0 PRJNA695273 98349 281 5.572115 15.65764315 Vermamoeba 1260114 Tubulinea other_Eukaryota 492 1.2899999999999996e-134   NTclustered gi|909719645|gb|KT185625.1| 5778 g97591 i0 98.221 49.067615658363 281 5 100 0 1 281 5311 5031 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 13788 492 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
12155492 12155492 PRJNA695273_P_NODE_107510_length_271_cov_1.555556_g106752_i0 PRJNA695273 107510 271 1.555556 4.21555676 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 435 2.11e-117   NTclustered gi|423292048|gb|JQ519470.1| 5778 g106752 i0 95.572 81.1918819188192 271 12 100 0 1 271 81 351 Vermamoeba vermiformis clone JG10.132_b5 alpha tubulin gene, partial cds blastn 22003 435 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
12158303 12158303 PRJNA695273_P_NODE_86090_length_298_cov_1.026667_g85332_i0 PRJNA695273 86090 298 1.026667 3.05946766 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 154 7.38e-33   NTclustered gi|909719647|gb|KT185627.1| 5778 g85332 i0 81.579 96.8422818791946 190 31 63 4 100 288 26303 26489 Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome blastn 28859 154 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
12158356 12158356 PRJNA695273_P_NODE_88390_length_293_cov_3.809091_g87632_i0 PRJNA695273 88390 293 3.809091 11.16063663 Cavenderia fasciculata 261658 Evosea other_Eukaryota 196 1.19e-45   NTclustered gi|470238151|ref|XM_004350982.1| 261658 g87632 i0 78.767 83.457337883959 292 62 99 0 1 292 400 109 Cavenderia fasciculata Ras GTPase (rapA), partial mRNA blastn 24453 196 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
13430112 13430112 PRJNA695273_P_NODE_107611_length_271_cov_1.555556_g106853_i0 PRJNA695273 107611 271 1.555556 4.21555676 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 244 3.82e-60   NTclustered gi|909719694|gb|KT185628.1| 5755 g106853 i0 83.212 6.21771217712177 274 39 100 6 1 271 355 86 Acanthamoeba castellanii isolate BCP-EM3VF21-1 mitochondrion, complete genome blastn 1685 244 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13432757 13432757 PRJNA695273_P_NODE_79291_length_310_cov_1.666667_g78533_i0 PRJNA695273 79291 310 1.666667 5.1666677 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 111 4.71e-20   NTclustered gi|470526273|ref|XM_004356675.1| 1257118 g78533 i0 94.444 1.95483870967742 72 4 23 0 195 266 408 337 Acanthamoeba castellanii str. Neff ribosomal protein L19e, putative (ACA1_174910), partial mRNA blastn 606 111 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14707383 14707383 PRJNA695273_P_NODE_54172_length_370_cov_4.407407_g53414_i0 PRJNA695273 54172 370 4.407407 16.3074059 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 521 2.2299999999999995e-143   NTclustered gi|300078498|gb|GU001160.1| 5755 g53414 i0 92.246 40.8756756756757 374 20 100 6 1 370 7424 7792 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 15124 521 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15210413 15210413 PRJNA695273_P_NODE_115912_length_261_cov_2.893617_g115154_i0 PRJNA695273 115912 261 2.893617 7.55234037 Acanthamoeba 5754 Discosea other_Eukaryota 472 1.54e-128   NTclustered gi|2044079968|gb|MZ272159.1| 5756 g115154 i0 99.234 100.501915708812 261 2 100 0 1 261 162 422 Acanthamoeba sp. isolate AcWT29 small subunit ribosomal RNA gene, partial sequence blastn 26231 472 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp.
18528089 18528089 PRJNA695273_P_NODE_100115_length_279_cov_6.354369_g99357_i0 PRJNA695273 100115 279 6.354369 17.72868951 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 490 4.59e-134   NTclustered gi|300078496|gb|GU001158.1| 5778 g99357 i0 98.905 25.179211469534 274 3 98 0 6 279 4385 4112 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7025 490 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
19035010 19035010 PRJNA695273_P_NODE_7095_length_1142_cov_11.263798_g6523_i0 PRJNA695273 7095 1142 11.263798 128.63257316 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 2049 0   NTclustered gi|441475833|emb|FN562425.4| 688089 g6523 i0 99.033 33.3134851138354 1138 11 99 0 5 1142 21 1158 Amoebozoa sp. SZA36 18S rRNA gene, isolate SZA36 blastn 38044 2069 0.990333494441759 Eukaryota Amoebozoa             Amoebozoa sp. SZA36
20309022 20309022 PRJNA695273_P_NODE_33876_length_468_cov_1.260759_g33118_i0 PRJNA695273 33876 468 1.260759 5.90035212 Acanthamoeba 5754 Discosea other_Eukaryota 859 0   NTclustered gi|2044079904|gb|MZ272098.1| 5756 g33118 i0 99.786 100.356837606838 468 1 100 0 1 468 1566 2033 Acanthamoeba sp. isolate AcW125A small subunit ribosomal RNA gene, partial sequence blastn 46967 859 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp.
20309618 20309618 PRJNA695273_P_NODE_74056_length_321_cov_0.931452_g73298_i0 PRJNA695273 74056 321 0.931452 2.98996092 Protostelium 472930 Evosea other_Eukaryota 588 1.8599999999999994e-163   NTclustered gi|262262921|gb|FJ766464.1| 472931 g73298 i0 99.689 45.3769470404984 322 0 100 1 1 321 1503 1182 Protostelium mycophagum strain KA-T15-2 small subunit ribosomal RNA gene, partial sequence blastn 14566 588 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
22860279 22860279 PRJNA695273_P_NODE_47498_length_393_cov_3.896875_g46740_i0 PRJNA695273 47498 393 3.896875 15.31471875 Acanthamoeba 5754 Discosea other_Eukaryota 697 0   NTclustered gi|1253255650|gb|MF350347.1| 5756 g46740 i0 98.731 100.709923664122 394 1 100 3 1 393 1240 1630 Acanthamoeba sp. strain Egy4 18S ribosomal RNA gene, partial sequence blastn 39579 697 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp.
23629461 23629461 PRJNA695273_P_NODE_123519_length_252_cov_2.055866_g122761_i0 PRJNA695273 123519 252 2.055866 5.18078232 Acytostelium subglobosum 361139 Evosea other_Eukaryota 196 9.98e-46   NTclustered gi|831753332|ref|XM_012892328.1| 1410327 g122761 i0 81.377 1.9484126984127 247 41 98 4 7 252 531 289 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 491 196 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;