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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA695140" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA695140 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
676068 676068 PRJNA695140_S_NODE_11341_length_159_cov_3.762295_g11160_i0 PRJNA695140 11341 159 3.762295 5.98204905 Pedosphaera parvula 1032527 Bacteria Bacteria 220 3.4099999999999998e-53   NTclustered gi|183579829|emb|AM905426.1| 320771 g11160 i0 91.824 109.849056603774 159 11 99 2 2 159 1802 1645 Bacterium Ellin514 23S rRNA gene, isolate Ellin514 blastn 17466 220 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Pedosphaerae Pedosphaerales Pedosphaeraceae Pedosphaera Pedosphaera parvula
3227028 3227028 PRJNA695140_S_NODE_11263_length_160_cov_1.577236_g11082_i0 PRJNA695140 11263 160 1.577236 2.5235776 Luteolibacter sp. LG18 2819286 Bacteria Bacteria 217 4.45e-52   NTclustered gi|2585939279|dbj|AP024600.1| 2819286 g11082 i0 91.25 17.00625 160 13 100 1 1 160 2218397 2218555 Luteolibacter sp. LG18 DNA, complete genome blastn 2721 217 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. LG18
4504088 4504088 PRJNA695140_S_NODE_10284_length_166_cov_3.007752_g10103_i0 PRJNA695140 10284 166 3.007752 4.99286832 Fontisphaera persica 2974023 Bacteria Bacteria 263 5.9e-66   NTclustered gi|2439237958|gb|CP116615.1| 2974023 g10103 i0 95.181 188.542168674699 166 8 100 0 1 166 3861794 3861959 Fontisphaera persica strain B-154 chromosome, complete genome blastn 31298 263 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Limisphaerales Fontisphaeraceae Fontisphaera Fontisphaera persica
5779648 5779648 PRJNA695140_S_NODE_8265_length_184_cov_1.802721_g8084_i0 PRJNA695140 8265 184 1.802721 3.31700664 Lacunisphaera limnophila 1838286 Bacteria Bacteria 171 4.15e-38   NTclustered gi|1070531674|gb|CP016094.1| 1838286 g8084 i0 85.057 60.4021739130435 174 18 93 7 7 178 2014843 2014676 Lacunisphaera limnophila strain IG16b, complete genome blastn 11114 171 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Lacunisphaera Lacunisphaera limnophila
7054695 7054695 PRJNA695140_S_NODE_2666_length_320_cov_2.607774_g2485_i0 PRJNA695140 2666 320 2.607774 8.3448768 Luteolibacter luteus 2728835 Bacteria Bacteria 340 5.719999999999999e-89   NTclustered gi|1835317346|gb|CP051774.1| 2728835 g2485 i0 90.98 260.0125 255 19 79 4 66 318 3804531 3804279 Luteolibacter luteus strain G-1-1-1 chromosome, complete genome blastn 83204 340 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter luteus
8329196 8329196 PRJNA695140_S_NODE_11427_length_159_cov_1.795082_g11246_i0 PRJNA695140 11427 159 1.795082 2.85418038 Luteolibacter sp. 1962973 Bacteria Bacteria 183 4.469999999999999e-42   NTclustered gi|2836248208|gb|CP121322.1| 1962973 g11246 i0 87.421 9.0440251572327 159 20 100 0 1 159 1010278 1010436 MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome blastn 1438 183 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp.
8329261 8329261 PRJNA695140_S_NODE_6267_length_210_cov_2.063584_g6086_i0 PRJNA695140 6267 210 2.063584 4.3335264 Fontisphaera persica 2974023 Bacteria Bacteria 263 7.82e-66   NTclustered gi|2439237958|gb|CP116615.1| 2974023 g6086 i0 89.756 83.1619047619048 205 21 98 0 6 210 3863230 3863026 Fontisphaera persica strain B-154 chromosome, complete genome blastn 17464 263 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Limisphaerales Fontisphaeraceae Fontisphaera Fontisphaera persica
12660928 12660928 PRJNA695140_S_NODE_2490_length_331_cov_4.329932_g2309_i0 PRJNA695140 2490 331 4.329932 14.33207492 Oleiharenicola 2100741 Bacteria Bacteria 62.1 5.18e-5   NTclustered gi|2707273910|gb|CP149973.1| 3034326 g2309 i0 95 1.53474320241692 40 1 12 1 282 321 459931 459893 Opitutia bacterium KCR 482 chromosome, complete genome blastn 508 62.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia       Opitutia bacterium KCR 482
15978773 15978773 PRJNA695140_S_NODE_113_length_1975_cov_50.620743_g35_i0 PRJNA695140 113 1975 50.620743 999.75967425 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 2833 0   NTclustered gi|2874254096|emb|OY970179.1| 412056 g35 i0 92.63 132.66582278481 1981 128 100 14 1 1975 1727236 1729204 MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 blastn 262015 2833 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
23628806 23628806 PRJNA695140_S_NODE_1719_length_403_cov_4.928962_g1538_i0 PRJNA695140 1719 403 4.928962 19.86371686 Fontisphaera persica 2974023 Bacteria Bacteria 333 1.23e-86   NTclustered gi|2439237958|gb|CP116615.1| 2974023 g1538 i0 85.03 40.560794044665 334 43 82 7 74 403 3862491 3862161 Fontisphaera persica strain B-154 chromosome, complete genome blastn 16346 333 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Limisphaerales Fontisphaeraceae Fontisphaera Fontisphaera persica
23628820 23628820 PRJNA695140_S_NODE_2739_length_315_cov_8.935252_g2558_i0 PRJNA695140 2739 315 8.935252 28.1460438 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 272 2.0799999999999998e-68   NTclustered gi|2874254040|emb|OY970364.1| 412056 g2558 i0 82.39 10.1365079365079 318 51 100 5 1 315 952605 952290 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04463.bin.c.15 genome assembly, chromosome: 1 blastn 3193 272 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;