RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA694557" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA694557 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1179592 1179592 PRJNA694557_P_NODE_22281_length_259_cov_9.102151_g22061_i0 PRJNA694557 22281 259 9.102151 23.57457109 Fungi 4751 Fungi Fungi 340 4.5e-89   NTclustered gi|658131632|emb|HF968958.1| 4874 g22061 i0 90.385 67.3436293436293 260 23 100 2 1 259 2251 1993 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 17442 340 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
23626013 23626013 PRJNA694557_P_NODE_19639_length_283_cov_1.185714_g19419_i0 PRJNA694557 19639 283 1.185714 3.35557062 Gamsiella multidivaricata 101098 Fungi Fungi 75 5.57e-9   NTclustered gi|2323774774|ref|XM_051554777.1| 101098 g19419 i0 88.525 0.734982332155477 61 7 22 0 2 62 338 278 Gamsiella multidivaricata putative negative regulator sulfur controller-3 (BC939DRAFT_445216), mRNA blastn 208 75 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
24899504 24899504 PRJNA694557_P_NODE_12980_length_366_cov_2.655290_g12760_i0 PRJNA694557 12980 366 2.65529 9.7183614 Radiomyces spectabilis 64574 Fungi Fungi 76.8 2.06e-9   NTclustered gi|2323745341|ref|XM_051565496.1| 64574 g12760 i0 87.692 1.08469945355191 65 8 18 0 279 343 593 529 Radiomyces spectabilis V-type proton ATPase proteolipid subunit (BYT42DRAFT_536970), mRNA blastn 397 76.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;