RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA694557" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 8 ✖

bioproject 1

  • PRJNA694557 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1949395 1949395 PRJNA694557_P_NODE_27122_length_212_cov_4.776978_g26902_i0 PRJNA694557 27122 212 4.776978 10.12719336 Trichovirus mali 12175 Viruses Viruses 364 2.109999999999999e-96   NTclustered gi|157310298|emb|AM498049.1| 12175 g26902 i0 97.653 97.9905660377358 213 3 100 2 1 212 781 570 Apple chlorotic leaf spot virus cp gene for coat protein, genomic RNA, Cydonia isolate from Salooni blastn 20774 364 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Trichovirus Trichovirus mali
1949482 1949482 PRJNA694557_P_NODE_82_length_4267_cov_18.876729_g72_i0 PRJNA694557 82 4267 18.876729 805.47002643 Red mite associated cystovirus 2936548 Viruses Viruses 7843 0   NTclustered gi|2239998150|gb|ON160022.1| 2936548 g72 i0 99.883 1.81392078743848 4263 3 99 2 1 4261 95 4357 Red mite associated cystovirus isolate RMACTV1-L P14, P15, P7, P2, P4, and P1 genes, complete cds blastn 7740 7843 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus
3224414 3224414 PRJNA694557_P_NODE_383_length_2446_cov_28.864307_g349_i0 PRJNA694557 383 2446 28.864307 706.02094922 Red mite associated cystovirus 2936548 Viruses Viruses 4344 0   NTclustered gi|2239998157|gb|ON160023.1| 2936548 g349 i0 100 1.613654946852 2352 0 96 0 59 2410 2352 1 Red mite associated cystovirus isolate RMACTV1-S P8, P12, P9, and P5 genes, complete cds blastn 3947 4344 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus
7052043 7052043 PRJNA694557_P_NODE_26286_length_235_cov_4.685185_g26066_i0 PRJNA694557 26286 235 4.685185 11.01018475 Red mite associated cystovirus 2936548 Viruses Viruses 429 8.33e-116   NTclustered gi|2239998150|gb|ON160022.1| 2936548 g26066 i0 99.574 1 235 1 100 0 1 235 5742 5508 Red mite associated cystovirus isolate RMACTV1-L P14, P15, P7, P2, P4, and P1 genes, complete cds blastn 235 429 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus
9601841 9601841 PRJNA694557_P_NODE_25248_length_243_cov_1.623529_g25028_i0 PRJNA694557 25248 243 1.623529 3.94517547 Red mite associated cystovirus 2936548 Viruses Viruses 449 6.65e-122   NTclustered gi|2239998150|gb|ON160022.1| 2936548 g25028 i0 100 1 243 0 100 0 1 243 4660 4902 Red mite associated cystovirus isolate RMACTV1-L P14, P15, P7, P2, P4, and P1 genes, complete cds blastn 243 449 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus
9601888 9601888 PRJNA694557_P_NODE_3148_length_870_cov_32.214555_g2954_i0 PRJNA694557 3148 870 32.214555 280.2666285 Pseudomonas phage ER16 2917704 Viruses Viruses 104 2.39e-17   NTclustered gi|2209092821|gb|OM650249.1| 2917704 g2954 i0 82.308 0.149425287356322 130 13 14 10 50 175 33 156 Pseudomonas phage ER16 segment M, complete sequence blastn 130 104 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae   Pseudomonas phage ER16
12152630 12152630 PRJNA694557_P_NODE_4990_length_666_cov_3.664418_g4774_i0 PRJNA694557 4990 666 3.664418 24.40502388 Red mite associated cystovirus 2936548 Viruses Viruses 1022 0   NTclustered gi|2239998150|gb|ON160022.1| 2936548 g4774 i0 100 0.83033033033033 553 0 83 0 93 645 6476 5924 Red mite associated cystovirus isolate RMACTV1-L P14, P15, P7, P2, P4, and P1 genes, complete cds blastn 553 1022 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus
18525176 18525176 PRJNA694557_P_NODE_13895_length_352_cov_1.896057_g13675_i0 PRJNA694557 13895 352 1.896057 6.67412064 Red mite associated cystovirus 2936548 Viruses Viruses 651 0   NTclustered gi|2239998150|gb|ON160022.1| 2936548 g13675 i0 100 1 352 0 100 0 1 352 5207 5558 Red mite associated cystovirus isolate RMACTV1-L P14, P15, P7, P2, P4, and P1 genes, complete cds blastn 352 651 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;