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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA694557" and tax_clade = "Sar"

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tax_phylum 4

tax_superkingdom 1

tax_clade 1

  • Sar · 14 ✖

bioproject 1

  • PRJNA694557 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
673379 673379 PRJNA694557_P_NODE_22801_length_255_cov_3.362637_g22581_i0 PRJNA694557 22801 255 3.362637 8.57472435 Trachelocercidae sp. 3 BS-2022 2930473 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2261268975|emb|OX095823.1| 2930473 g22581 i0 100 0.223529411764706 29 0 11 0 227 255 37 9 Trachelocercidae sp. 3 BS-2022 partial 18S rRNA gene, isolate SAMEA13863269, clone N34:18S_rRNA::TRINITY_DN3988_c0_g1_i52:177-1769(-) blastn 57 54.7 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Trachelocercidae   Trachelocercidae sp. 3 BS-2022
3224133 3224133 PRJNA694557_P_NODE_13323_length_360_cov_6.759582_g13103_i0 PRJNA694557 13323 360 6.759582 24.3344952 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 632 9.58e-177   NTclustered gi|512134943|gb|JX178902.1| 1295638 g13103 i0 99.145 96.2194444444444 351 3 98 0 1 351 1337 987 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 34639 632 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
6283394 6283394 PRJNA694557_P_NODE_12325_length_378_cov_4.436066_g12105_i0 PRJNA694557 12325 378 4.436066 16.76832948 Spumella 89043 SAR_Eukaryotes SAR_Eukaryotes 575 1.7299999999999994e-159   NTclustered gi|2055919757|gb|MZ420315.1| 2849683 g12105 i0 94.837 97.3386243386243 368 19 97 0 1 368 1703 1336 Spumella similis strain Gwanje012018A2 large subunit ribosomal RNA gene, partial sequence blastn 36794 575 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella similis
7051854 7051854 PRJNA694557_P_NODE_16006_length_322_cov_3.722892_g15786_i0 PRJNA694557 16006 322 3.722892 11.98771224 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 568 2.4299999999999993e-157   NTclustered gi|166048041|emb|CU364162.1| 100861 g15786 i0 98.447 97.8291925465839 322 5 100 0 1 322 346 667 Aphanomyces euteiches cDNA blastn 31501 568 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
7051996 7051996 PRJNA694557_P_NODE_24326_length_247_cov_0.971264_g24106_i0 PRJNA694557 24326 247 0.971264 2.39902208 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 398 2.4899999999999996e-106   NTclustered gi|698793876|ref|XR_717098.1| 112090 g24106 i0 98.246 92.2226720647773 228 2 91 1 1 226 2317 2090 Aphanomyces astaci 28S ribosomal RNA rRNA blastn 22779 398 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
7557315 7557315 PRJNA694557_P_NODE_12386_length_377_cov_3.026316_g12166_i0 PRJNA694557 12386 377 3.026316 11.40921132 Leptopharynx 502089 SAR_Eukaryotes SAR_Eukaryotes 592 1.71e-164   NTclustered gi|2006880679|emb|HG995635.1| 187299 g12166 i0 96.893 94.1724137931034 354 10 94 1 25 377 472 825 uncultured ciliate genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, clone 2f5efc6c blastn 35503 593 0.998313659359191 Eukaryota Sar   Ciliophora         uncultured ciliate
9601657 9601657 PRJNA694557_P_NODE_14688_length_339_cov_6.187970_g14468_i0 PRJNA694557 14688 339 6.18797 20.9772183 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.032   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g14468 i0 100 0.0825958702064897 28 0 8 0 1 28 14 41 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
12152554 12152554 PRJNA694557_P_NODE_24470_length_246_cov_3.317919_g24250_i0 PRJNA694557 24470 246 3.317919 8.16208074 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 261 3.39e-65   NTclustered gi|238617605|gb|FJ973380.1| 45107 g24250 i0 85.714 39.8739837398374 252 30 100 3 1 246 1873 1622 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 9809 261 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
12659133 12659133 PRJNA694557_P_NODE_5570_length_623_cov_6.205455_g5352_i0 PRJNA694557 5570 623 6.205455 38.65998465 Spumella 89043 SAR_Eukaryotes SAR_Eukaryotes 926 0   NTclustered gi|2055919763|gb|MZ420321.1| 1841649 g5352 i0 94.536 97.1573033707865 604 25 97 6 22 623 1374 1971 Spumella bureschii strain Yangjije021018A19 large subunit ribosomal RNA gene, partial sequence blastn 60529 931 0.994629430719656 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella bureschii
17251298 17251298 PRJNA694557_P_NODE_24834_length_245_cov_0.895349_g24614_i0 PRJNA694557 24834 245 0.895349 2.19360505 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 122 1.66e-23   NTclustered gi|2651357788|gb|PP174303.1| 41631 g24614 i0 77.083 32.6775510204082 240 38 93 17 1 229 4037 3804 Colpoda sp. isolate CIL1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8006 122 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
18525437 18525437 PRJNA694557_P_NODE_5055_length_661_cov_4.773810_g4839_i0 PRJNA694557 5055 661 4.77381 31.5548841 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 970 0   NTclustered gi|238617605|gb|FJ973380.1| 45107 g4839 i0 92.996 78.0847201210287 671 37 100 6 1 661 1881 1211 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 51614 970 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
19800445 19800445 PRJNA694557_P_NODE_9616_length_442_cov_3.663957_g9396_i0 PRJNA694557 9616 442 3.663957 16.19468994 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 399 1.33e-106   NTclustered gi|166034714|emb|CU356751.1| 100861 g9396 i0 84.864 21.7714932126697 403 53 90 7 25 421 506 906 Aphanomyces euteiches cDNA blastn 9623 399 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
21075706 21075706 PRJNA694557_P_NODE_17337_length_306_cov_5.489270_g17117_i0 PRJNA694557 17337 306 5.48927 16.7971662 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 272 2.01e-68   NTclustered gi|1624698156|ref|XM_029013946.1| 189622 g17117 i0 85.393 1.05555555555556 267 33 87 5 3 269 37 297 Babesia ovata CTP synthase, putative (BOVATA_050290), partial mRNA blastn 323 272 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
24899581 24899581 PRJNA694557_P_NODE_17100_length_309_cov_2.720339_g16880_i0 PRJNA694557 17100 309 2.720339 8.40584751 Babesia bigemina 5866 SAR_Eukaryotes SAR_Eukaryotes 479 1.1199999999999996e-130   NTclustered gi|833494855|ref|XM_012915027.1| 5866 g16880 i0 96.552 1082.63106796116 290 9 94 1 10 299 503 215 Babesia bigemina hypothetical protein, conserved partial mRNA blastn 334533 479 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;