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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA692200" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 19 ✖

bioproject 1

  • PRJNA692200 · 19 ✖

analysis 1

  • blastn · 19 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
672563 672563 PRJNA692200_S_NODE_1121_length_431_cov_320.225131_g1074_i0 PRJNA692200 1121 431 320.225131 1380.17031461 Betacoronavirus pandemicum 3418604 Viruses Viruses 132 5.19e-26   NTclustered gi|2165833299|emb|OV195597.1| 2697049 g1074 i0 96.296 1.19257540603248 81 1 18 1 27 105 40 120 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 514 132 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
5776004 5776004 PRJNA692200_S_NODE_1005_length_441_cov_322.469388_g960_i0 PRJNA692200 1005 441 322.469388 1422.09000108 Betacoronavirus pandemicum 3418604 Viruses Viruses 132 5.32e-26   NTclustered gi|2165833299|emb|OV195597.1| 2697049 g960 i0 96.296 1.16553287981859 81 1 18 1 27 105 40 120 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 514 132 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
7051508 7051508 PRJNA692200_S_NODE_4406_length_301_cov_1320.654762_g4349_i0 PRJNA692200 4406 301 1320.654762 3975.17083362 Betacoronavirus pandemicum 3418604 Viruses Viruses 71.3 7.73e-8   NTclustered gi|2165836883|emb|OV197187.1| 2697049 g4349 i0 87.719 12.8073089700997 57 5 18 1 1 55 103 159 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3855 71.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
7051532 7051532 PRJNA692200_S_NODE_5126_length_286_cov_233.860759_g5069_i0 PRJNA692200 5126 286 233.860759 668.84177074 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 56.5 0.002   NTclustered gi|2609791689|gb|OR652421.1| 10376 g5069 i0 97.059 0.118881118881119 34 0 12 1 1 33 12995 13028 Human gammaherpesvirus 4 strain 720, partial genome blastn 34 56.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
7557168 7557168 PRJNA692200_S_NODE_20366_length_166_cov_0.888889_g20309_i0 PRJNA692200 20366 166 0.888889 1.47555574 Potyvirus 12195 Viruses Viruses 305 9.67e-79   NTclustered gi|157739355|gb|EU021065.1| 12844 g20309 i0 100 99.3795180722892 165 0 99 0 2 166 1448 1284 Sweet potato feathery mottle virus isolate Fio polyprotein gene, partial cds blastn 16497 305 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus batataplumei
8325941 8325941 PRJNA692200_S_NODE_2687_length_351_cov_980.519868_g2630_i0 PRJNA692200 2687 351 980.519868 3441.62473668 Betacoronavirus pandemicum 3418604 Viruses Viruses 137 8.9e-28   NTclustered gi|2165834303|emb|OV196009.1| 2697049 g2630 i0 96.471 23.8461538461538 85 0 24 2 8 90 29995 29912 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8370 137 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
8326111 8326111 PRJNA692200_S_NODE_8127_length_242_cov_1733.860104_g8070_i0 PRJNA692200 8127 242 1733.860104 4195.94145168 Betacoronavirus pandemicum 3418604 Viruses Viruses 73.1 1.67e-8   NTclustered gi|2165836883|emb|OV197187.1| 2697049 g8070 i0 87.931 15.9338842975207 58 5 23 1 187 242 160 103 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3856 73.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
9601270 9601270 PRJNA692200_S_NODE_2628_length_353_cov_984.404605_g2571_i0 PRJNA692200 2628 353 984.404605 3474.94825565 Betacoronavirus pandemicum 3418604 Viruses Viruses 137 8.959999999999999e-28   NTclustered gi|2165834303|emb|OV196009.1| 2697049 g2571 i0 96.471 23.7110481586402 85 0 24 2 8 90 29995 29912 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8370 137 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
12151779 12151779 PRJNA692200_S_NODE_12770_length_201_cov_2.559211_g12713_i0 PRJNA692200 12770 201 2.559211 5.14401411 Mitovirus sp. 2587224 Viruses Viruses 89.8 1.33e-13   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g12713 i0 98.039 0.253731343283582 51 1 25 0 149 199 111 61 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 51 89.8 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
12152099 12152099 PRJNA692200_S_NODE_5090_length_287_cov_4.260504_g5033_i0 PRJNA692200 5090 287 4.260504 12.22764648 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.027   NTclustered gi|2054791230|tpg|BK049928.1| 2832643 g5033 i0 100 0.0975609756097561 28 0 10 0 31 58 1596 1569 MAG TPA_asm: Caudoviricetes sp. isolate ctwKx1, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
13426585 13426585 PRJNA692200_S_NODE_2731_length_349_cov_417.023333_g2674_i0 PRJNA692200 2731 349 417.023333 1455.41143217 Betacoronavirus pandemicum 3418604 Viruses Viruses 132 4.12e-26   NTclustered gi|2165833299|emb|OV195597.1| 2697049 g2674 i0 96.296 1.84240687679083 81 1 23 1 27 105 40 120 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 643 132 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
13426735 13426735 PRJNA692200_S_NODE_7231_length_253_cov_270.774510_g7174_i0 PRJNA692200 7231 253 270.77451 685.0595103 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 56.5 0.002   NTclustered gi|2609791689|gb|OR652421.1| 10376 g7174 i0 97.059 0.134387351778656 34 0 13 1 1 33 12995 13028 Human gammaherpesvirus 4 strain 720, partial genome blastn 34 56.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
15975608 15975608 PRJNA692200_S_NODE_3953_length_312_cov_476.121673_g3896_i0 PRJNA692200 3953 312 476.121673 1485.49961976 Betacoronavirus pandemicum 3418604 Viruses Viruses 132 3.64e-26   NTclustered gi|2165833299|emb|OV195597.1| 2697049 g3896 i0 96.296 1.6474358974359 81 1 25 1 27 105 40 120 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 514 132 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
17250389 17250389 PRJNA692200_S_NODE_10694_length_217_cov_2.773810_g10637_i0 PRJNA692200 10694 217 2.77381 6.0191677 Mimivirus LCMiAC01 2506608 Viruses Viruses 75 4.09e-9   NTclustered gi|1588062284|gb|MK500402.1| 2506608 g10637 i0 97.674 5.78801843317972 43 1 20 0 153 195 17130 17088 MAG: Mimivirus LCMiAC01 genomic sequence blastn 1256 75 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Mimivirus LCMiAC01
18524809 18524809 PRJNA692200_S_NODE_2815_length_346_cov_449.451178_g2758_i0 PRJNA692200 2815 346 449.451178 1555.10107588 Betacoronavirus pandemicum 3418604 Viruses Viruses 132 4.09e-26   NTclustered gi|2165833299|emb|OV195597.1| 2697049 g2758 i0 96.296 1.48554913294798 81 1 23 1 27 105 40 120 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 514 132 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
18525001 18525001 PRJNA692200_S_NODE_8495_length_238_cov_295.169312_g8438_i0 PRJNA692200 8495 238 295.169312 702.50296256 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 56.5 0.002   NTclustered gi|2609791689|gb|OR652421.1| 10376 g8438 i0 97.059 0.142857142857143 34 0 14 1 206 238 13028 12995 Human gammaherpesvirus 4 strain 720, partial genome blastn 34 56.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
19799783 19799783 PRJNA692200_S_NODE_4116_length_308_cov_217.069498_g4059_i0 PRJNA692200 4116 308 217.069498 668.57405384 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 56.5 0.002   NTclustered gi|2609791689|gb|OR652421.1| 10376 g4059 i0 97.059 0.11038961038961 34 0 11 1 1 33 12995 13028 Human gammaherpesvirus 4 strain 720, partial genome blastn 34 56.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
19799801 19799801 PRJNA692200_S_NODE_4496_length_299_cov_7.856000_g4439_i0 PRJNA692200 4496 299 7.856 23.48944 Zebrafish picornavirus 1 2304617 Viruses Viruses 538 1.7499999999999993e-148   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g4439 i0 99.003 4.68896321070234 301 1 100 2 1 299 7932 8232 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 1402 538 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
19799958 19799958 PRJNA692200_S_NODE_9876_length_225_cov_1.494318_g9819_i0 PRJNA692200 9876 225 1.494318 3.3622155 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.02   NTclustered gi|9964314|ref|NC_002520.1| 28321 g9819 i0 94.286 0.155555555555556 35 1 15 1 96 129 153475 153509 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;