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contig_metadata

26 rows where analysis = "blastn", bioproject = "PRJNA692200" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 26 ✖

tax_clade 1

bioproject 1

  • PRJNA692200 · 26 ✖

analysis 1

  • blastn · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1949009 1949009 PRJNA692200_S_NODE_9642_length_227_cov_2.359551_g9585_i0 PRJNA692200 9642 227 2.359551 5.35618077 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 189 1.4799999999999996e-43   NTclustered gi|698776103|ref|XM_009822794.1| 112090 g9585 i0 97.297 9.34361233480176 111 3 49 0 117 227 1211 1101 Aphanomyces astaci 60S ribosomal protein mRNA blastn 2121 189 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
3731119 3731119 PRJNA692200_S_NODE_7163_length_254_cov_95.814634_g7106_i0 PRJNA692200 7163 254 95.814634 243.36917036 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 460 3.2299999999999997e-125   NTclustered gi|2099741709|gb|OK271022.1| 253176 g7106 i0 99.216 100.086614173228 255 1 100 1 1 254 661 915 Aphanomyces cladogamus voucher CCIBt3854 small subunit ribosomal RNA gene, partial sequence blastn 25422 464 0.991379310344828 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cladogamus
4500635 4500635 PRJNA692200_S_NODE_14604_length_190_cov_1.106383_g14547_i0 PRJNA692200 14604 190 1.106383 2.1021277 Phytophthora kernoviae 325452 SAR_Eukaryotes SAR_Eukaryotes 217 5.469999999999999e-52   NTclustered gi|2248513156|ref|NC_063798.1| 325452 g14547 i0 89.535 62.6315789473684 172 16 90 2 20 190 31858 31688 Phytophthora kernoviae isolate 00844/4 mitochondrion, complete genome blastn 11900 217 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora kernoviae
5776219 5776219 PRJNA692200_S_NODE_18965_length_169_cov_9.700000_g18908_i0 PRJNA692200 18965 169 9.7 16.393 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 300 4.56e-77   NTclustered gi|166039764|emb|CU357372.1| 100861 g18908 i0 99.394 97.6213017751479 165 1 98 0 1 165 531 367 Aphanomyces euteiches cDNA blastn 16498 300 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
5776298 5776298 PRJNA692200_S_NODE_23045_length_157_cov_2.277778_g22988_i0 PRJNA692200 23045 157 2.277778 3.57611146 Plasmopara halstedii 4781 SAR_Eukaryotes SAR_Eukaryotes 58.4 2.78e-4   NTclustered gi|1378164915|ref|XM_024716554.1| 4781 g22988 i0 100 0.197452229299363 31 0 20 0 42 72 812 782 Plasmopara halstedii uncharacterized protein (PHALS_02046), partial mRNA blastn 31 58.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
6283267 6283267 PRJNA692200_S_NODE_3925_length_313_cov_21.155303_g3868_i0 PRJNA692200 3925 313 21.155303 66.21609839 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.008   NTclustered gi|698813671|ref|XM_009841563.1| 112090 g3868 i0 100 0.463258785942492 29 0 9 0 51 79 502 474 Aphanomyces astaci hypothetical protein mRNA blastn 145 54.7 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
7051217 7051217 PRJNA692200_S_NODE_13506_length_196_cov_3.993197_g13449_i0 PRJNA692200 13506 196 3.993197 7.82666612 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 110 9.92e-20   NTclustered gi|673015481|ref|XM_008863480.1| 157072 g13449 i0 93.243 0.673469387755102 74 5 38 0 122 195 401 328 Aphanomyces invadans 60S ribosomal protein L44 mRNA blastn 132 110 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
7051303 7051303 PRJNA692200_S_NODE_1706_length_394_cov_264.918841_g1649_i0 PRJNA692200 1706 394 264.918841 1043.78023354 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 640 6.319999999999999e-179   NTclustered gi|363498776|gb|JN662487.1| 120398 g1649 i0 98.093 92.0482233502538 367 7 93 0 2 368 31 397 Aphanomyces stellatus strain GF 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 36267 640 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
7051648 7051648 PRJNA692200_S_NODE_946_length_447_cov_408.806533_g190_i1 PRJNA692200 946 447 408.806533 1827.36520251 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 688 0   NTclustered gi|542687346|ref|NC_022178.1| 1202772 g190 i1 97.297 98.8456375838926 407 7 90 2 44 447 6320 5915 Achlya hypogyna mitochondrion, complete genome blastn 44184 688 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
8325847 8325847 PRJNA692200_S_NODE_19187_length_169_cov_1.300000_g19130_i0 PRJNA692200 19187 169 1.3 2.197 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 132 1.7600000000000002e-26   NTclustered gi|673014097|ref|XM_008862788.1| 157072 g19130 i0 86.508 1.43786982248521 126 10 70 3 50 168 532 407 Aphanomyces invadans hypothetical protein mRNA blastn 243 132 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
8326004 8326004 PRJNA692200_S_NODE_47_length_779_cov_19.550685_g35_i0 PRJNA692200 47 779 19.550685 152.29983615 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 1301 0   NTclustered gi|1111669722|ref|NC_032051.1| 112090 g35 i0 97.154 105.667522464698 773 17 99 5 1 769 2625 1854 Aphanomyces astaci isolate AP03 mitochondrion, complete genome blastn 82315 1301 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
8326087 8326087 PRJNA692200_S_NODE_7367_length_252_cov_1.438424_g7310_i0 PRJNA692200 7367 252 1.438424 3.62482848 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 154 6.09e-33   NTclustered gi|669157573|ref|XM_008616127.1| 1156394 g7310 i0 87.313 2.91666666666667 134 17 53 0 116 249 540 407 Saprolegnia diclina VS20 30S ribosomal protein S24e mRNA blastn 735 154 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
9601029 9601029 PRJNA692200_S_NODE_13068_length_199_cov_2.786667_g13011_i0 PRJNA692200 13068 199 2.786667 5.54546733 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 158 3.56e-34   NTclustered gi|166043221|emb|CU357867.1| 100861 g13011 i0 82.653 14.2211055276382 196 16 92 14 17 199 934 744 Aphanomyces euteiches cDNA blastn 2830 158 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
9601165 9601165 PRJNA692200_S_NODE_188_length_596_cov_154.548446_g35_i1 PRJNA692200 188 596 154.548446 921.10873816 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 907 0   NTclustered gi|1111669722|ref|NC_032051.1| 112090 g35 i1 98.084 93.1291946308725 522 8 87 2 1 520 2625 2104 Aphanomyces astaci isolate AP03 mitochondrion, complete genome blastn 55505 907 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
10876679 10876679 PRJNA692200_S_NODE_14629_length_189_cov_305.607143_g14572_i0 PRJNA692200 14629 189 305.607143 577.59750027 Aphanomyces brasiliensis 2525538 SAR_Eukaryotes SAR_Eukaryotes 287 4.08e-73   NTclustered gi|2098511708|gb|OK235679.1| 2525538 g14572 i0 100 82.3862433862434 155 0 82 0 1 155 548 702 Aphanomyces brasiliensis voucher CCIBt4545 small subunit ribosomal RNA gene, partial sequence blastn 15571 287 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces brasiliensis
10876844 10876844 PRJNA692200_S_NODE_21749_length_162_cov_5.070796_g21692_i0 PRJNA692200 21749 162 5.070796 8.21468952 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 97.1 6.14e-16   NTclustered gi|698807229|ref|XM_009838342.1| 112090 g21692 i0 89.157 0.512345679012346 83 2 48 4 1 77 417 498 Aphanomyces astaci polyubiquitin mRNA blastn 83 97.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
12152121 12152121 PRJNA692200_S_NODE_570_length_492_cov_285.997743_g534_i0 PRJNA692200 570 492 285.997743 1407.10889556 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 806 0   NTclustered gi|698793876|ref|XR_717098.1| 112090 g534 i0 99.326 91.4857723577236 445 3 90 0 1 445 2102 2546 Aphanomyces astaci 28S ribosomal RNA rRNA blastn 45011 806 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
14701728 14701728 PRJNA692200_S_NODE_19832_length_167_cov_2.084746_g19775_i0 PRJNA692200 19832 167 2.084746 3.48152582 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 130 6.29e-26   NTclustered gi|673036683|ref|XM_008874081.1| 157072 g19775 i0 92.391 0.550898203592814 92 6 55 1 74 165 655 565 Aphanomyces invadans hypothetical protein mRNA blastn 92 130 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
15975568 15975568 PRJNA692200_S_NODE_2793_length_347_cov_202.248322_g2736_i0 PRJNA692200 2793 347 202.248322 701.80167734 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 556 5.709999999999999e-154   NTclustered gi|1111669722|ref|NC_032051.1| 112090 g2736 i0 100 92.7752161383285 301 0 87 0 46 346 463 763 Aphanomyces astaci isolate AP03 mitochondrion, complete genome blastn 32193 556 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
18524611 18524611 PRJNA692200_S_NODE_15415_length_186_cov_1.109489_g15358_i0 PRJNA692200 15415 186 1.109489 2.06364954 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 219 1.48e-52   NTclustered gi|166041668|emb|CU357700.1| 100861 g15358 i0 92.715 23.2150537634409 151 11 81 0 29 179 891 741 Aphanomyces euteiches cDNA blastn 4318 219 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
19799607 19799607 PRJNA692200_S_NODE_18036_length_173_cov_2.838710_g17979_i0 PRJNA692200 18036 173 2.83871 4.9109683 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 87.9 3.98e-13   NTclustered gi|673039864|ref|XM_008875671.1| 157072 g17979 i0 94.737 0.61271676300578 57 2 32 1 117 172 259 203 Aphanomyces invadans ubiquitin-60S ribosomal protein L40 mRNA blastn 106 87.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
19799682 19799682 PRJNA692200_S_NODE_216_length_581_cov_58.304511_g190_i0 PRJNA692200 216 581 58.304511 338.74920891 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 998 0   NTclustered gi|542687346|ref|NC_022178.1| 1202772 g190 i0 97.603 109.903614457831 584 10 100 2 1 581 6497 5915 Achlya hypogyna mitochondrion, complete genome blastn 63854 998 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
20305643 20305643 PRJNA692200_S_NODE_15356_length_186_cov_1.795620_g15299_i0 PRJNA692200 15356 186 1.79562 3.3398532 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 150 5.48e-32   NTclustered gi|698807045|ref|XM_009838250.1| 112090 g15299 i0 94.792 1.04838709677419 96 5 52 0 87 182 619 524 Aphanomyces astaci 60S ribosomal protein mRNA blastn 195 150 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
21075143 21075143 PRJNA692200_S_NODE_17917_length_174_cov_1.232000_g17860_i0 PRJNA692200 17917 174 1.232 2.14368 Saprolegnia ferax 4770 SAR_Eukaryotes SAR_Eukaryotes 226 8.149999999999998e-55   NTclustered gi|50261276|ref|NC_005984.1| 4770 g17860 i0 90.588 75.8390804597701 170 16 98 0 3 172 15806 15975 Saprolegnia ferax mitochondrion, complete genome blastn 13196 226 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia ferax
21075172 21075172 PRJNA692200_S_NODE_19277_length_169_cov_0.866667_g19220_i0 PRJNA692200 19277 169 0.866667 1.46466723 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 213 6.12e-51   NTclustered gi|1111669722|ref|NC_032051.1| 112090 g19220 i0 89.412 23.4556213017751 170 17 100 1 1 169 34554 34723 Aphanomyces astaci isolate AP03 mitochondrion, complete genome blastn 3964 213 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
24899117 24899117 PRJNA692200_S_NODE_23480_length_154_cov_5.752381_g23423_i0 PRJNA692200 23480 154 5.752381 8.85866674 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 174 2.59e-39   NTclustered gi|673046094|ref|XM_008878786.1| 157072 g23423 i0 91.339 0.824675324675325 127 11 82 0 1 127 376 502 Aphanomyces invadans hypothetical protein mRNA blastn 127 174 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;