RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA692200" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA692200 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9601032 9601032 PRJNA692200_S_NODE_13128_length_199_cov_1.166667_g13071_i0 PRJNA692200 13128 199 1.166667 2.32166733 Neobodo designis 312471 Euglenozoa other_Eukaryota 294 2.6e-75   NTclustered gi|197723537|gb|EF681922.2| 312471 g13071 i0 93.467 138.91959798995 199 12 100 1 1 199 1028 1225 Neobodo designis strain HFCC97 28S ribosomal RNA gene, partial sequence blastn 27645 294 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
10107922 10107922 PRJNA692200_S_NODE_17408_length_176_cov_1.944882_g17351_i0 PRJNA692200 17408 176 1.944882 3.42299232 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 198 1.8e-46   NTclustered gi|440222375|gb|JX030043.1| 5659 g17351 i0 86.957 109.642045454545 184 14 100 7 1 176 1589 1770 Leishmania amazonensis isolate LaPH8.rRNA.13 28S ribosomal RNA (LSU-alpha), partial sequence blastn 19297 200 0.99 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
13426557 13426557 PRJNA692200_S_NODE_22971_length_157_cov_3.833333_g22914_i0 PRJNA692200 22971 157 3.833333 6.01833281 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 274 2.54e-69   NTclustered gi|1996609220|gb|MW694339.1| 127150 g22914 i0 99.338 89.4267515923567 151 1 96 0 1 151 1101 951 Rhynchomonas nasuta isolate G431 small subunit ribosomal RNA gene, partial sequence blastn 14040 274 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
22349979 22349979 PRJNA692200_S_NODE_14918_length_188_cov_2.215827_g14861_i0 PRJNA692200 14918 188 2.215827 4.16575476 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 318 1.44e-82   NTclustered gi|1996609220|gb|MW694339.1| 127150 g14861 i0 98.876 71.2127659574468 178 2 95 0 8 185 1378 1201 Rhynchomonas nasuta isolate G431 small subunit ribosomal RNA gene, partial sequence blastn 13388 318 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;