RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA692200" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA692200 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3223812 3223812 PRJNA692200_S_NODE_4783_length_293_cov_3.651639_g4726_i0 PRJNA692200 4783 293 3.651639 10.69930227 Acropora millepora 45264 Cnidaria other_Eukaryota 52.8 0.027   NTclustered gi|2114135399|ref|XM_029355121.2| 45264 g4726 i0 100 0.286689419795222 28 0 10 0 183 210 605 578 PREDICTED: Acropora millepora uncharacterized LOC114974984 (LOC114974984), mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora
10876987 10876987 PRJNA692200_S_NODE_5369_length_282_cov_6.815451_g5312_i0 PRJNA692200 5369 282 6.815451 19.21957182 Anemonia sulcata 6108 Cnidaria other_Eukaryota 65.8 3.34e-6   NTclustered gi|2917940752|emb|OZ237570.1| 6108 g5312 i0 93.333 1.18085106382979 45 2 16 1 93 136 8541690 8541734 Anemonia sulcata genome assembly, chromosome: 16 blastn 333 65.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
10877043 10877043 PRJNA692200_S_NODE_7469_length_250_cov_8.442786_g7412_i0 PRJNA692200 7469 250 8.442786 21.106965 Anemonia sulcata 6108 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2917940766|emb|OZ237573.1| 6108 g7412 i0 100 1.204 30 0 12 0 84 113 11609410 11609381 Anemonia sulcata genome assembly, chromosome: 19 blastn 301 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
17250489 17250489 PRJNA692200_S_NODE_15534_length_185_cov_2.705882_g15477_i0 PRJNA692200 15534 185 2.705882 5.0058817 Chloromyxum leydigi 279112 Cnidaria other_Eukaryota 80.5 7.25e-11   NTclustered gi|241911749|gb|FJ417055.1| 279112 g15477 i0 88.235 0.367567567567568 68 6 36 2 119 185 97 31 Chloromyxum leydigi isolate M0180 28S large subunit ribosomal RNA gene, partial sequence blastn 68 80.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Chloromyxidae Chloromyxum Chloromyxum leydigi
18524590 18524590 PRJNA692200_S_NODE_1455_length_409_cov_1470.586111_g1400_i0 PRJNA692200 1455 409 1470.586111 6014.69719399 Sphaeromyxa sp. M0416 650982 Cnidaria other_Eukaryota 89.8 2.99e-13   NTclustered gi|241911767|gb|FJ417073.1| 650982 g1400 i0 88 10.6528117359413 75 9 18 0 25 99 1 75 Sphaeromyxa sp. M0416 28S large subunit ribosomal RNA gene, partial sequence blastn 4357 89.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Sphaeromyxidae Sphaeromyxa Sphaeromyxa sp. M0416
21074968 21074968 PRJNA692200_S_NODE_10397_length_219_cov_18.082353_g10340_i0 PRJNA692200 10397 219 18.082353 39.60035307 Leuckartiara octona 13108 Cnidaria other_Eukaryota 60.2 1.16e-4   NTclustered gi|952952512|gb|KT809325.1| 13108 g10340 i0 91.111 0.401826484018265 45 3 20 1 68 111 759 715 Leuckartiara octona mitochondrion, partial genome blastn 88 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Pandeidae Leuckartiara Leuckartiara octona

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;