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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA692200" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 19 ✖

tax_clade 1

bioproject 1

  • PRJNA692200 · 19 ✖

analysis 1

  • blastn · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
672568 672568 PRJNA692200_S_NODE_11421_length_211_cov_2.228395_g11364_i0 PRJNA692200 11421 211 2.228395 4.70191345 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 324 3.56e-84   NTclustered gi|300676732|gb|GQ377662.1| 188950 g11364 i0 99.438 93.2796208530806 178 1 84 0 4 181 943 1120 Bodomorpha minima alpha-tubulin (Atub) gene, partial cds blastn 19682 324 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
672755 672755 PRJNA692200_S_NODE_1961_length_380_cov_1236.377644_g1904_i0 PRJNA692200 1961 380 1236.377644 4698.2350472 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 560 4.87e-155   NTclustered gi|224996436|gb|FJ654268.1| 188950 g1904 i0 96.254 18.5342105263158 347 3 89 3 43 380 475 130 Bodomorpha minima 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7043 560 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
3223845 3223845 PRJNA692200_S_NODE_5963_length_271_cov_510.441441_g5906_i0 PRJNA692200 5963 271 510.441441 1383.29630511 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 496 9.55e-136   NTclustered gi|238617602|gb|FJ973377.1| 188950 g5906 i0 100 99.1070110701107 268 0 99 0 4 271 61 328 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 26858 496 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
4500540 4500540 PRJNA692200_S_NODE_10784_length_216_cov_3.712575_g10727_i0 PRJNA692200 10784 216 3.712575 8.019162 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 394 2.75e-105   NTclustered gi|238617602|gb|FJ973377.1| 188950 g10727 i0 99.537 20.6990740740741 216 1 100 0 1 216 2404 2189 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 4471 394 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
5776514 5776514 PRJNA692200_S_NODE_865_length_456_cov_33.368550_g825_i0 PRJNA692200 865 456 33.36855 152.160588 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 281 5.18e-71   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g825 i0 81.522 39.4890350877193 368 44 80 16 85 449 4039 3693 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 18007 281 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
7051586 7051586 PRJNA692200_S_NODE_706_length_473_cov_1044.040094_g668_i0 PRJNA692200 706 473 1044.040094 4938.30964462 Verrucomonas longifila 629764 SAR_Eukaryotes SAR_Eukaryotes 204 1.2e-47   NTclustered gi|290760489|gb|GQ144692.1| 629764 g668 i0 81.673 44.3298097251586 251 40 53 6 161 409 1245 1491 Cercozoa sp. CC-2009f large subunit ribosomal RNA gene, partial sequence blastn 20968 204 1 Eukaryota Sar   Cercozoa Thecofilosea Ventricleftida   Verrucomonas Verrucomonas longifila
8325751 8325751 PRJNA692200_S_NODE_15267_length_186_cov_3.481752_g15210_i0 PRJNA692200 15267 186 3.481752 6.47605872 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 339 1.0899999999999998e-88   NTclustered gi|238617602|gb|FJ973377.1| 188950 g15210 i0 99.465 39.1989247311828 187 0 100 1 1 186 2706 2892 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 7291 339 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
9601223 9601223 PRJNA692200_S_NODE_22128_length_162_cov_0.893805_g22071_i0 PRJNA692200 22128 162 0.893805 1.4479641 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 126 7.83e-25   NTclustered gi|1402550473|gb|MH488759.1| 2231160 g22071 i0 96.104 42.9382716049383 77 3 48 0 2 78 2068 2144 Rosculus sp. isolate CSA small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 6956 126 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
12151804 12151804 PRJNA692200_S_NODE_13950_length_193_cov_383.409722_g13893_i0 PRJNA692200 13950 193 383.409722 739.98076346 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 220 4.31e-53   NTclustered gi|224996436|gb|FJ654268.1| 188950 g13893 i0 93.506 24.8704663212435 154 0 75 3 47 190 178 25 Bodomorpha minima 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4800 220 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
12152039 12152039 PRJNA692200_S_NODE_30_length_831_cov_655.675192_g21_i0 PRJNA692200 30 831 655.675192 5448.66084552 Rosculus hawesi 2231161 SAR_Eukaryotes SAR_Eukaryotes 1397 0   NTclustered gi|1402550477|gb|MH488763.1| 2231161 g21 i0 98.731 18.0685920577617 788 6 95 2 45 830 1358 573 Rosculus hawesi isolate C1C small subunit ribosomal RNA gene, partial sequence blastn 15015 1397 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus hawesi
12152056 12152056 PRJNA692200_S_NODE_3510_length_324_cov_11.930909_g3453_i0 PRJNA692200 3510 324 11.930909 38.65614516 Rosculus hawesi 2231161 SAR_Eukaryotes SAR_Eukaryotes 446 1.1899999999999999e-120   NTclustered gi|1402550478|gb|MH488764.1| 2231161 g3453 i0 99.194 3.99691358024691 248 1 77 1 1 248 329 575 Rosculus hawesi isolate MSUPP161R small subunit ribosomal RNA gene, partial sequence blastn 1295 446 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus hawesi
13426498 13426498 PRJNA692200_S_NODE_1991_length_379_cov_418.815152_g1934_i0 PRJNA692200 1991 379 418.815152 1587.30942608 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 560 4.85e-155   NTclustered gi|224996436|gb|FJ654268.1| 188950 g1934 i0 96.254 18.5831134564644 347 3 89 3 42 379 475 130 Bodomorpha minima 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7043 560 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
13426604 13426604 PRJNA692200_S_NODE_31_length_830_cov_609.801536_g21_i1 PRJNA692200 31 830 609.801536 5061.3527488 Rosculus hawesi 2231161 SAR_Eukaryotes SAR_Eukaryotes 1391 0   NTclustered gi|1402550477|gb|MH488763.1| 2231161 g21 i1 98.604 18.0903614457831 788 7 95 2 44 829 1358 573 Rosculus hawesi isolate C1C small subunit ribosomal RNA gene, partial sequence blastn 15015 1391 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus hawesi
15975291 15975291 PRJNA692200_S_NODE_12853_length_200_cov_20.695364_g12796_i0 PRJNA692200 12853 200 20.695364 41.390728 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 357 3.29e-94   NTclustered gi|238617602|gb|FJ973377.1| 188950 g12796 i0 99 23.915 200 1 99 1 2 200 574 375 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 4783 357 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
16482081 16482081 PRJNA692200_S_NODE_16453_length_180_cov_168.969466_g16396_i0 PRJNA692200 16453 180 168.969466 304.1450388 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 255 1.08e-63   NTclustered gi|33309639|gb|AF411276.1| 188950 g16396 i0 98.611 80.0166666666667 144 2 80 0 6 149 1015 1158 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 14403 255 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
19799589 19799589 PRJNA692200_S_NODE_1716_length_394_cov_3.504348_g1659_i0 PRJNA692200 1716 394 3.504348 13.80713112 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 712 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g1659 i0 99.239 86.2309644670051 394 3 100 0 1 394 2114 1721 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 33975 712 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
23625502 23625502 PRJNA692200_S_NODE_22919_length_157_cov_8.833333_g22862_i0 PRJNA692200 22919 157 8.833333 13.86833281 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 289 9.07e-74   NTclustered gi|238617602|gb|FJ973377.1| 188950 g22862 i0 100 42.5987261146497 156 0 99 0 1 156 1667 1512 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 6688 289 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
24899065 24899065 PRJNA692200_S_NODE_20880_length_164_cov_9.452174_g20823_i0 PRJNA692200 20880 164 9.452174 15.50156536 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 300 4.43e-77   NTclustered gi|238617602|gb|FJ973377.1| 188950 g20823 i0 100 99.7378048780488 162 0 99 0 3 164 836 997 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 16357 300 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
25405743 25405743 PRJNA692200_S_NODE_7300_length_252_cov_1018.221675_g7243_i0 PRJNA692200 7300 252 1018.221675 2565.918621 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 460 3.2e-125   NTclustered gi|33309639|gb|AF411276.1| 188950 g7243 i0 99.603 99.9007936507936 252 1 100 0 1 252 783 1034 Bodomorpha minima 18S ribosomal RNA gene, complete sequence blastn 25175 460 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;