RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA692200" and tax_kingdom = "Heunggongvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Heunggongvirae · 5 ✖

bioproject 1

  • PRJNA692200 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7051532 7051532 PRJNA692200_S_NODE_5126_length_286_cov_233.860759_g5069_i0 PRJNA692200 5126 286 233.860759 668.84177074 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 56.5 0.002   NTclustered gi|2609791689|gb|OR652421.1| 10376 g5069 i0 97.059 0.118881118881119 34 0 12 1 1 33 12995 13028 Human gammaherpesvirus 4 strain 720, partial genome blastn 34 56.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
12152099 12152099 PRJNA692200_S_NODE_5090_length_287_cov_4.260504_g5033_i0 PRJNA692200 5090 287 4.260504 12.22764648 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.027   NTclustered gi|2054791230|tpg|BK049928.1| 2832643 g5033 i0 100 0.0975609756097561 28 0 10 0 31 58 1596 1569 MAG TPA_asm: Caudoviricetes sp. isolate ctwKx1, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
13426735 13426735 PRJNA692200_S_NODE_7231_length_253_cov_270.774510_g7174_i0 PRJNA692200 7231 253 270.77451 685.0595103 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 56.5 0.002   NTclustered gi|2609791689|gb|OR652421.1| 10376 g7174 i0 97.059 0.134387351778656 34 0 13 1 1 33 12995 13028 Human gammaherpesvirus 4 strain 720, partial genome blastn 34 56.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
18525001 18525001 PRJNA692200_S_NODE_8495_length_238_cov_295.169312_g8438_i0 PRJNA692200 8495 238 295.169312 702.50296256 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 56.5 0.002   NTclustered gi|2609791689|gb|OR652421.1| 10376 g8438 i0 97.059 0.142857142857143 34 0 14 1 206 238 13028 12995 Human gammaherpesvirus 4 strain 720, partial genome blastn 34 56.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
19799783 19799783 PRJNA692200_S_NODE_4116_length_308_cov_217.069498_g4059_i0 PRJNA692200 4116 308 217.069498 668.57405384 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 56.5 0.002   NTclustered gi|2609791689|gb|OR652421.1| 10376 g4059 i0 97.059 0.11038961038961 34 0 11 1 1 33 12995 13028 Human gammaherpesvirus 4 strain 720, partial genome blastn 34 56.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;