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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA691918" and tax_phylum = "Chlorophyta"

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tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA691918 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1179215 1179215 PRJNA691918_S_NODE_61_length_247_cov_14034.324074_g60_i0 PRJNA691918 61 247 14034.324074 34664.78046278 Scenedesmaceae 3086 Plants Plants 335 1.9799999999999992e-87   NTclustered gi|2692951646|ref|NC_086753.1| 113531 g60 i0 96.552 120.890688259109 203 6 84 1 3 204 82459 82661 Tetradesmus distendus strain FBCC-A1020 chloroplast, complete genome blastn 29860 337 0.99406528189911 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus distendus
7051113 7051113 PRJNA691918_S_NODE_366_length_168_cov_9.912409_g365_i0 PRJNA691918 366 168 9.912409 16.65284712 Coelastrum microporum 55409 Plants Plants 257 2.79e-64   NTclustered gi|2386955046|ref|NC_068582.1| 55409 g365 i0 97.351 99.25 151 4 90 0 1 151 86812 86962 Coelastrum microporum chloroplast, complete genome blastn 16674 257 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Coelastrum Coelastrum microporum
10876541 10876541 PRJNA691918_S_NODE_9_length_335_cov_86.023026_g8_i0 PRJNA691918 9 335 86.023026 288.1771371 Tetradesmus obliquus 3088 Plants Plants 577 4.2199999999999986e-160   NTclustered gi|1240946771|gb|KX756229.1| 3088 g8 i0 97.904 121.113432835821 334 6 99 1 1 333 80881 80548 Tetradesmus obliquus chloroplast, complete genome blastn 40573 577 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
11382744 11382744 PRJNA691918_S_NODE_209_length_193_cov_18879.975309_g208_i0 PRJNA691918 209 193 18879.975309 36438.35234637 Scenedesmaceae 3086 Plants Plants 252 1.53e-62   NTclustered gi|1090895397|gb|KX131180.1| 1867922 g208 i0 98.592 109.953367875648 142 2 75 0 49 190 114080 113939 Hariotina sp. MMOGRB0030F chloroplast, complete genome blastn 21221 252 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Hariotina Hariotina sp. MMOGRB0030F
13426262 13426262 PRJNA691918_S_NODE_91_length_227_cov_15340.581633_g90_i0 PRJNA691918 91 227 15340.581633 34823.12030691 Tetradesmus obliquus 3088 Plants Plants 302 1.82e-77   NTclustered gi|406668623|gb|JX401406.1| 3088 g90 i0 97.714 77.0837004405286 175 4 77 0 5 179 61 235 Acutodesmus obliquus isolate SE001 large subunit ribosomal RNA gene, partial sequence blastn 17498 302 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
15207815 15207815 PRJNA691918_S_NODE_132_length_214_cov_17032.622951_g131_i0 PRJNA691918 132 214 17032.622951 36449.81311514 Chlorophyta 3041 Plants Plants 300 6.1e-77   NTclustered gi|359385314|emb|FR865731.1| 3088 g131 i0 99.394 77.1028037383178 165 1 77 0 1 165 946 1110 Scenedesmus obliquus genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, culture collection CCAP 276/52 blastn 16500 300 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
16482059 16482059 PRJNA691918_S_NODE_133_length_214_cov_16984.901639_g132_i0 PRJNA691918 133 214 16984.901639 36347.68950746 Chlorophyta 3041 Plants Plants 294 2.8400000000000003e-75   NTclustered gi|359385314|emb|FR865731.1| 3088 g132 i0 98.788 77.1028037383178 165 2 77 0 1 165 946 1110 Scenedesmus obliquus genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, culture collection CCAP 276/52 blastn 16500 294 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
17250352 17250352 PRJNA691918_S_NODE_94_length_226_cov_15346.517949_g93_i0 PRJNA691918 94 226 15346.517949 34683.13056474 Desmodesmus sp. HH 10203 2050669 Plants Plants 300 6.51e-77   NTclustered gi|1273809525|gb|MF326555.1| 2050669 g93 i0 96.667 79.3893805309735 180 6 80 0 46 225 1390 1211 Desmodesmus sp. HH 10203 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17942 300 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Desmodesmus Desmodesmus sp. HH 10203
22856599 22856599 PRJNA691918_S_NODE_58_length_248_cov_14318.188940_g57_i0 PRJNA691918 58 248 14318.18894 35509.1085712 Scenedesmaceae 3086 Plants Plants 346 9.19e-91   NTclustered gi|2692951646|ref|NC_086753.1| 113531 g57 i0 97.537 117.737903225806 203 4 84 1 45 246 82661 82459 Tetradesmus distendus strain FBCC-A1020 chloroplast, complete genome blastn 29199 348 0.994252873563218 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus distendus
23625184 23625184 PRJNA691918_S_NODE_179_length_199_cov_15961.517857_g178_i0 PRJNA691918 179 199 15961.517857 31763.42053543 Pectinodesmus pectinatus 91197 Plants Plants 76.8 1.02e-9   NTclustered gi|1331211015|ref|NC_036659.1| 91197 g178 i0 94 20.4221105527638 50 3 25 0 147 196 12708 12659 Pectinodesmus pectinatus mitochondrion, complete genome blastn 4064 76.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Pectinodesmus Pectinodesmus pectinatus
23625186 23625186 PRJNA691918_S_NODE_219_length_192_cov_19082.596273_g218_i0 PRJNA691918 219 192 19082.596273 36638.58484416 Desmodesmus abundans 77547 Plants Plants 246 7.07e-61   NTclustered gi|2312613210|ref|NC_066651.1| 77547 g218 i0 97.887 108.822916666667 142 3 76 0 4 145 74418 74559 Desmodesmus abundans strain FBCC-A1277 chloroplast, complete genome blastn 20894 246 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Desmodesmus Desmodesmus abundans
23625190 23625190 PRJNA691918_S_NODE_59_length_248_cov_14255.944700_g58_i0 PRJNA691918 59 248 14255.9447 35354.742856 Coelastrum microporum 55409 Plants Plants 340 4.27e-89   NTclustered gi|2386955046|ref|NC_068582.1| 55409 g58 i0 97.03 120.387096774194 202 6 84 0 3 204 88173 88374 Coelastrum microporum chloroplast, complete genome blastn 29856 340 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Coelastrum Coelastrum microporum
24898763 24898763 PRJNA691918_S_NODE_180_length_199_cov_10799.880952_g179_i0 PRJNA691918 180 199 10799.880952 21491.76309448 Tetradesmus obliquus 3088 Plants Plants 246 7.379999999999999e-61   NTclustered gi|1240946771|gb|KX756229.1| 3088 g179 i0 100 38.2914572864322 133 0 67 0 48 180 82240 82108 Tetradesmus obliquus chloroplast, complete genome blastn 7620 246 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
25405679 25405679 PRJNA691918_S_NODE_120_length_218_cov_16108.834225_g119_i0 PRJNA691918 120 218 16108.834225 35117.2586105 Scenedesmaceae 3086 Plants Plants 300 6.23e-77   NTclustered gi|109156688|gb|DQ644505.1| 3073 g119 i0 98.81 77.0688073394495 168 2 77 0 51 218 235 68 'Chlorella' fusca strain KCTC AG10033 18S ribosomal RNA gene, partial sequence blastn 16801 300 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus fuscus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;