RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA691918" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Annelida · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA691918 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5775982 5775982 PRJNA691918_S_NODE_205_length_194_cov_182.496933_g204_i0 PRJNA691918 205 194 182.496933 354.04405002 Lumbriculus sp. EZ-2019 2480966 Annelida Annelida 300 5.420000000000001e-77   NTclustered gi|1494622620|gb|MK076419.1| 2480966 g204 i0 98.81 77.9845360824742 168 2 87 0 26 193 3420 3253 Lumbriculus sp. EZ-2019 isolate ANN_LUMva large subunit ribosomal RNA gene, partial sequence blastn 15129 300 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Lumbriculida Lumbriculidae Lumbriculus Lumbriculus sp. EZ-2019
15975187 15975187 PRJNA691918_S_NODE_113_length_219_cov_16451.430851_g112_i0 PRJNA691918 113 219 16451.430851 36028.63356369 Lumbriculus sp. EZ-2019 2480966 Annelida Annelida 300 6.27e-77   NTclustered gi|1494622620|gb|MK076419.1| 2480966 g112 i0 98.817 70.812785388127807 169 0 77 2 51 218 3420 3253 Lumbriculus sp. EZ-2019 isolate ANN_LUMva large subunit ribosomal RNA gene, partial sequence blastn 15508 300 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Lumbriculida Lumbriculidae Lumbriculus Lumbriculus sp. EZ-2019
21074940 21074940 PRJNA691918_S_NODE_257_length_185_cov_215.110390_g256_i0 PRJNA691918 257 185 215.11039 397.9542215 Lumbriculus sp. EZ-2019 2480966 Annelida Annelida 305 1.1e-78   NTclustered gi|1494622620|gb|MK076419.1| 2480966 g256 i0 99.405 83.8162162162162 168 1 91 0 17 184 3420 3253 Lumbriculus sp. EZ-2019 isolate ANN_LUMva large subunit ribosomal RNA gene, partial sequence blastn 15506 305 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Lumbriculida Lumbriculidae Lumbriculus Lumbriculus sp. EZ-2019
23625183 23625183 PRJNA691918_S_NODE_119_length_218_cov_16171.775401_g118_i0 PRJNA691918 119 218 16171.775401 35254.47037418 Lumbriculus sp. EZ-2019 2480966 Annelida Annelida 311 2.8800000000000003e-80   NTclustered gi|1494622620|gb|MK076419.1| 2480966 g118 i0 100 71.0321100917431 168 0 77 0 50 217 3420 3253 Lumbriculus sp. EZ-2019 isolate ANN_LUMva large subunit ribosomal RNA gene, partial sequence blastn 15485 311 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Lumbriculida Lumbriculidae Lumbriculus Lumbriculus sp. EZ-2019

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;