RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA690592" and tax_phylum = "Xenacoelomorpha"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Xenacoelomorpha · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690592 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8324964 8324964 PRJNA690592_S_NODE_54227_length_424_cov_2.296296_g53213_i0 PRJNA690592 54227 424 2.296296 9.73629504 Hallangia proporoides 996731 Xenacoelomorpha other_Eukaryota 93.5 2.41e-14   NTclustered gi|378781026|emb|FR837780.1| 996731 g53213 i0 92.308 16.502358490566 65 5 15 0 124 188 1291 1355 Hallangia proporoides partial 28S rRNA gene, specimen voucher UJ06-14 blastn 6997 93.5 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Hallangiidae Hallangia Hallangia proporoides
10874990 10874990 PRJNA690592_S_NODE_135469_length_289_cov_1.750000_g134455_i0 PRJNA690592 135469 289 1.75 5.0575 Proporus bermudensis 996672 Xenacoelomorpha other_Eukaryota 102 2.62e-17   NTclustered gi|378781070|emb|FR837824.1| 996672 g134455 i0 81.679 43.9792387543253 131 17 45 5 1 131 1250 1127 Proporus bermudensis partial 28S rRNA gene, specimen voucher AWBer02 blastn 12710 102 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Proporidae Proporus Proporus bermudensis
11382412 11382412 PRJNA690592_S_NODE_112729_length_312_cov_1.610879_g111715_i0 PRJNA690592 112729 312 1.610879 5.02594248 Acoela 31265 Xenacoelomorpha other_Eukaryota 69.4 2.9e-7   NTclustered gi|378781076|emb|FR837830.1| 996676 g111715 i0 87.931 1.38461538461538 58 7 19 0 255 312 1054 997 Pseudohaplogonaria rodmani partial 28S rRNA gene, specimen voucher MHPh blastn 432 69.4 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Haploposthiidae Pseudohaplogonaria Pseudohaplogonaria rodmani
14700420 14700420 PRJNA690592_S_NODE_210792_length_242_cov_2.278107_g209778_i0 PRJNA690592 210792 242 2.278107 5.51301894 Daku woorimensis 996722 Xenacoelomorpha other_Eukaryota 121 5.889999999999999e-23   NTclustered gi|378781020|emb|FR837774.1| 996722 g209778 i0 93.75 33.5123966942149 80 5 33 0 158 237 227 148 Daku woorimensis partial 28S rRNA gene, specimen voucher MHDw blastn 8110 121 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Dakuidae Daku Daku woorimensis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;