RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA690592" and tax_phylum = "Tardigrada"

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tax_superkingdom 1

tax_phylum 1

  • Tardigrada · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690592 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5775609 5775609 PRJNA690592_S_NODE_88685_length_344_cov_1.243542_g87671_i0 PRJNA690592 88685 344 1.243542 4.27778448 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 56.5 0.003   NTclustered gi|2493449007|ref|XM_055483839.1| 2943436 g87671 i0 96.97 0.767441860465116 33 1 10 0 298 330 3111 3079 PREDICTED: Paramacrobiotus metropolitanus G protein-coupled receptor kinase 1-like (LOC129589233), transcript variant X1, mRNA blastn 264 56.5 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
12150256 12150256 PRJNA690592_S_NODE_139650_length_285_cov_5.353774_g138636_i0 PRJNA690592 139650 285 5.353774 15.2582559 Calohypsibius ornatus 947157 Tardigrada other_Eukaryota 97.1 1.2e-15   NTclustered gi|1519192601|gb|MH079505.1| 947157 g138636 i0 87.059 16.1649122807018 85 11 30 0 201 285 201 285 Calohypsibius ornatus isolate Tar801 28S ribosomal RNA gene, partial sequence blastn 4607 97.1 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Calohypsibiidae Calohypsibius Calohypsibius ornatus
13424693 13424693 PRJNA690592_S_NODE_130371_length_294_cov_1.393665_g129357_i0 PRJNA690592 130371 294 1.393665 4.0973751 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 318 2.439999999999999e-82   NTclustered gi|2493458319|ref|XM_055486313.1| 2943436 g129357 i0 86.348 32.6904761904762 293 38 99 2 1 292 797 506 PREDICTED: Paramacrobiotus metropolitanus actin-related protein 2 (LOC129590881), mRNA blastn 9611 318 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
22348595 22348595 PRJNA690592_S_NODE_185498_length_251_cov_1.325843_g184484_i0 PRJNA690592 185498 251 1.325843 3.32786593 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 248 2.7e-61   NTclustered gi|2493392886|ref|XM_055487985.1| 2943436 g184484 i0 86.607 41.4820717131474 224 30 89 0 13 236 321 544 PREDICTED: Paramacrobiotus metropolitanus ATP synthase subunit alpha, mitochondrial-like (LOC129592040), mRNA blastn 10412 248 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus
23624182 23624182 PRJNA690592_S_NODE_201159_length_246_cov_0.890173_g200145_i0 PRJNA690592 201159 246 0.890173 2.18982558 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 178 3.5099999999999993e-40   NTclustered gi|2493463315|ref|XM_055487665.1| 2943436 g200145 i0 81.364 9.90650406504065 220 39 89 2 23 241 6386 6168 PREDICTED: Paramacrobiotus metropolitanus pre-mRNA-processing-splicing factor 8 (LOC129591837), mRNA blastn 2437 178 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;