RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA690592" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA690592 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14699670 14699670 PRJNA690592_S_NODE_107172_length_319_cov_0.934959_g106158_i0 PRJNA690592 107172 319 0.934959 2.98251921 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 171 7.91e-38   NTclustered gi|347516615|gb|HQ339915.1| 32597 g106158 i0 80.172 15.5862068965517 232 42 72 4 79 308 336 565 Perkinsus olseni strain ALG1 heat shock protein 90 gene, partial cds blastn 4972 171 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
21581272 21581272 PRJNA690592_S_NODE_36697_length_503_cov_17.181395_g35687_i0 PRJNA690592 36697 503 17.181395 86.42241685 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 363 2e-95   NTclustered gi|294953618|ref|XM_002787808.1| 423536 g35687 i0 85.429 51.0775347912525 350 49 69 2 21 369 419 71 Perkinsus marinus ATCC 50983 40S ribosomal protein S14, putative, mRNA blastn 25692 364 0.997252747252747 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;