RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA690592" and tax_phylum = "Nematomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Nematomorpha · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690592 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14699779 14699779 PRJNA690592_S_NODE_124812_length_299_cov_1.977876_g123798_i0 PRJNA690592 124812 299 1.977876 5.91384924 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 161 4.429999999999999e-35   NTclustered gi|2733952544|ref|XM_065460754.1| 3053472 g123798 i0 80 1.19732441471572 220 42 73 2 1 219 328 110 PREDICTED: Gordionus sp. m RMFG-2023 ubiquitin-conjugating enzyme E2-17 kDa (LOC135925437), mRNA blastn 358 161 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
18523188 18523188 PRJNA690592_S_NODE_170275_length_261_cov_2.047872_g169261_i0 PRJNA690592 170275 261 2.047872 5.34494592 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 159 1.3599999999999999e-34   NTclustered gi|2733962267|ref|XM_065465536.1| 3053472 g169261 i0 84.024 16.0229885057471 169 23 64 4 4 170 2419 2253 PREDICTED: Gordionus sp. m RMFG-2023 transitional endoplasmic reticulum ATPase (LOC135929045), mRNA blastn 4182 159 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;