RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA690592" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690592 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4499199 4499199 PRJNA690592_S_NODE_166184_length_264_cov_2.005236_g165170_i0 PRJNA690592 166184 264 2.005236 5.29382304 Vittaforma corneae 42399 Fungi Fungi 56.5 0.002   NTclustered gi|667639983|ref|XR_552275.1| 993615 g165170 i0 97.059 1.36742424242424 34 0 13 1 232 264 1849 1882 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 361 56.5 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
5007408 5007408 PRJNA690592_S_NODE_4944_length_1203_cov_43.961947_g4307_i1 PRJNA690592 4944 1203 43.961947 528.86222241 Fungi 4751 Fungi Fungi 183 4.17e-41   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g4307 i1 95.652 11.2959268495428 115 4 10 1 1003 1117 5537 5650 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13589 183 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
6283077 6283077 PRJNA690592_S_NODE_5065_length_1192_cov_43.580876_g4307_i2 PRJNA690592 5065 1192 43.580876 519.48404192 Fungi 4751 Fungi Fungi 183 4.13e-41   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g4307 i2 95.652 11.4001677852349 115 4 10 1 87 201 5650 5537 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13589 183 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
11382589 11382589 PRJNA690592_S_NODE_4789_length_1215_cov_44.304729_g4307_i0 PRJNA690592 4789 1215 44.304729 538.30245735 Fungi 4751 Fungi Fungi 183 4.22e-41   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g4307 i0 95.652 11.1843621399177 115 4 9 1 1015 1129 5537 5650 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13589 183 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
15207524 15207524 PRJNA690592_S_NODE_12232_length_833_cov_49.352632_g11411_i0 PRJNA690592 12232 833 49.352632 411.10742456 Fungi 4751 Fungi Fungi 183 2.849999999999999e-41   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g11411 i0 95.652 15.5738295318127 115 4 14 1 87 201 5650 5537 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12973 183 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
21581288 21581288 PRJNA690592_S_NODE_5077_length_1191_cov_34.769231_g4307_i3 PRJNA690592 5077 1191 34.769231 414.10154121 Fungi 4751 Fungi Fungi 183 4.13e-41   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g4307 i3 95.652 11.4097397145256 115 4 10 1 87 201 5650 5537 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13589 183 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;