RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA690592" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690592 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13425554 13425554 PRJNA690592_S_NODE_39411_length_488_cov_1.296386_g38399_i0 PRJNA690592 39411 488 1.296386 6.32636368 Chlamydiales bacterium CRIB33 553509 Bacteria Bacteria 739 0   NTclustered gi|196051292|gb|EU683887.1| 553509 g38399 i0 94.07 110.665983606557 489 26 100 3 1 488 21 507 Chlamydiales bacterium CRIB33 16S ribosomal RNA gene, partial sequence blastn 54005 739 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium CRIB33
19798029 19798029 PRJNA690592_S_NODE_159836_length_269_cov_1.571429_g158822_i0 PRJNA690592 159836 269 1.571429 4.22714401 uncultured Chlamydiales bacterium 174324 Bacteria Bacteria 54.7 0.007   NTclustered gi|2874253712|emb|OY969554.1| 174324 g158822 i0 100 0.107806691449814 29 0 11 0 183 211 822741 822713 MAG: uncultured Chlamydiales bacterium isolate MFD04540.bin.c.3 genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     uncultured Chlamydiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;