RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA690592" and tax_phylum = "Bryozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690592 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
671570 671570 PRJNA690592_S_NODE_218361_length_233_cov_3.025000_g217347_i0 PRJNA690592 218361 233 3.025 7.04825 Watersipora subatra 2589382 Bryozoa other_Eukaryota 52.8 0.021   NTclustered gi|2795726367|ref|XM_068086914.1| 2589382 g217347 i0 100 0.240343347639485 28 0 12 0 77 104 274 247 PREDICTED: Watersipora subatra uncharacterized protein (LOC137400583), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Watersiporidae Watersipora Watersipora subatra
8324129 8324129 PRJNA690592_S_NODE_148027_length_278_cov_2.629268_g147013_i0 PRJNA690592 148027 278 2.629268 7.30936504 Membranipora membranacea 95170 Bryozoa other_Eukaryota 285 2.32e-72   NTclustered gi|2320635325|gb|ON868447.1| 95170 g147013 i0 85.609 33.4604316546763 271 39 97 0 7 277 19 289 Membranipora membranacea calmodulin-like protein 1 mRNA, complete cds blastn 9302 285 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea
17249783 17249783 PRJNA690592_S_NODE_66074_length_389_cov_3.696203_g65060_i0 PRJNA690592 66074 389 3.696203 14.37822967 Membranipora membranacea 95170 Bryozoa other_Eukaryota 187 9.77e-43   NTclustered gi|2320635325|gb|ON868447.1| 95170 g65060 i0 86.127 43.0411311053985 173 24 44 0 217 389 18 190 Membranipora membranacea calmodulin-like protein 1 mRNA, complete cds blastn 16743 187 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea
24897915 24897915 PRJNA690592_S_NODE_32160_length_535_cov_2.642857_g31153_i0 PRJNA690592 32160 535 2.642857 14.13928495 Membranipora membranacea 95170 Bryozoa other_Eukaryota 399 1.6299999999999996e-106   NTclustered gi|2320635325|gb|ON868447.1| 95170 g31153 i0 86.501 67.059813084112207 363 49 68 0 173 535 18 380 Membranipora membranacea calmodulin-like protein 1 mRNA, complete cds blastn 35877 399 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;