RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA690592" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA690592 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15974695 15974695 PRJNA690592_S_NODE_73173_length_373_cov_1.530000_g72159_i0 PRJNA690592 73173 373 1.53 5.7069 uncultured marine thaumarchaeote SAT1000_05_G10 1456358 Archaea Archaea 52.8 0.035   NTclustered gi|663531667|gb|KF901195.1| 1456358 g72159 i0 100 0.0750670241286863 28 0 8 0 257 284 9026 8999 Uncultured marine thaumarchaeote SAT1000_05_G10 genomic sequence blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota         uncultured marine thaumarchaeote SAT1000_05_G10
18522731 18522731 PRJNA690592_S_NODE_106675_length_319_cov_1.630081_g105661_i0 PRJNA690592 106675 319 1.630081 5.19995839 Nitrosopumilus zosterae 718286 Archaea Archaea 52.8 0.03   NTclustered gi|2289589374|dbj|AP026695.1| 718286 g105661 i0 100 0.0877742946708464 28 0 9 0 199 226 1310204 1310231 Nitrosopumilus zosterae NM25 DNA, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus zosterae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;