contig_metadata
19 rows where analysis = "blastn", bioproject = "PRJNA690592" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 672103 | 672103 | PRJNA690592_S_NODE_89701_length_342_cov_1.732342_g88687_i0 | PRJNA690592 | 89701 | 342 | 1.732342 | 5.92460964 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 477 | 4.499999999999998e-130 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g88687 | i0 | 91.86 | 184.938596491228 | 344 | 25 | 100 | 3 | 1 | 342 | 1726797 | 1727139 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 63249 | 477 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 4498762 | 4498762 | PRJNA690592_S_NODE_101224_length_326_cov_1.371542_g100210_i0 | PRJNA690592 | 101224 | 326 | 1.371542 | 4.47122692 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 54.7 | 0.009 | NTclustered | gi|2874254106|emb|OY970189.1| | 100233 | g100210 | i0 | 96.875 | 0.098159509202454 | 32 | 1 | 10 | 0 | 100 | 131 | 1498363 | 1498332 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1 | blastn | 32 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 5775027 | 5775027 | PRJNA690592_S_NODE_206325_length_244_cov_0.929825_g205311_i0 | PRJNA690592 | 206325 | 244 | 0.929825 | 2.268773 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 374 | 4.1399999999999986e-99 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g205311 | i0 | 94.309 | 181.975409836066 | 246 | 11 | 100 | 3 | 1 | 244 | 1726884 | 1727128 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 44402 | 374 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 5775306 | 5775306 | PRJNA690592_S_NODE_41745_length_475_cov_2.838308_g40731_i0 | PRJNA690592 | 41745 | 475 | 2.838308 | 13.481963 | Planctomycetales bacterium ZRK34 | 2723666 | Bacteria | Bacteria | 54.7 | 0.013 | NTclustered | gi|1898316769|gb|CP050848.1| | 2723666 | g40731 | i0 | 100 | 0.0610526315789474 | 29 | 0 | 6 | 0 | 270 | 298 | 2922813 | 2922785 | Planctomycetales bacterium ZRK34 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetales bacterium ZRK34 | |||
| 7050495 | 7050495 | PRJNA690592_S_NODE_57366_length_414_cov_1.841642_g56352_i0 | PRJNA690592 | 57366 | 414 | 1.841642 | 7.62439788 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 527 | 5.419999999999999e-145 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g56352 | i0 | 89.688 | 182.93961352657 | 417 | 38 | 100 | 4 | 1 | 414 | 2002311 | 2001897 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 75737 | 527 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 7050726 | 7050726 | PRJNA690592_S_NODE_90806_length_340_cov_2.831461_g89792_i0 | PRJNA690592 | 90806 | 340 | 2.831461 | 9.6269674 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 172 | 2.36e-38 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g89792 | i0 | 78.519 | 51.25 | 270 | 52 | 79 | 6 | 11 | 277 | 3078634 | 3078900 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 17425 | 172 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 10876053 | 10876053 | PRJNA690592_S_NODE_76249_length_366_cov_3.139932_g75235_i0 | PRJNA690592 | 76249 | 366 | 3.139932 | 11.49215112 | Schlesneria sphaerica | 3373610 | Bacteria | Bacteria | 60.2 | 2.08e-4 | NTclustered | gi|2844279856|gb|CP172346.1| | 3373610 | g75235 | i0 | 94.872 | 0.10655737704918 | 39 | 0 | 11 | 2 | 302 | 340 | 6286491 | 6286527 | Schlesneria sp. T3-172 chromosome, complete genome | blastn | 39 | 60.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Schlesneria | Schlesneria sphaerica | |
| 13425554 | 13425554 | PRJNA690592_S_NODE_39411_length_488_cov_1.296386_g38399_i0 | PRJNA690592 | 39411 | 488 | 1.296386 | 6.32636368 | Chlamydiales bacterium CRIB33 | 553509 | Bacteria | Bacteria | 739 | 0 | NTclustered | gi|196051292|gb|EU683887.1| | 553509 | g38399 | i0 | 94.07 | 110.665983606557 | 489 | 26 | 100 | 3 | 1 | 488 | 21 | 507 | Chlamydiales bacterium CRIB33 16S ribosomal RNA gene, partial sequence | blastn | 54005 | 739 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium CRIB33 | |||
| 13932899 | 13932899 | PRJNA690592_S_NODE_134911_length_290_cov_1.064516_g133897_i0 | PRJNA690592 | 134911 | 290 | 1.064516 | 3.0870964 | Verrucomicrobiales | 48461 | Bacteria | Bacteria | 204 | 7.01e-48 | NTclustered | gi|1815841271|gb|CP049143.1| | 2711231 | g133897 | i0 | 82.684 | 233.772413793103 | 231 | 39 | 79 | 1 | 5 | 234 | 5626819 | 5627049 | Roseimicrobium sp. ORNL1 chromosome, complete genome | blastn | 67794 | 204 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Roseimicrobium | Roseimicrobium sp. ORNL1 | |
| 14699744 | 14699744 | PRJNA690592_S_NODE_119512_length_305_cov_1.060345_g118498_i0 | PRJNA690592 | 119512 | 305 | 1.060345 | 3.23405225 | Verrucomicrobium spinosum | 2736 | Bacteria | Bacteria | 303 | 7.11e-78 | NTclustered | gi|12583973|gb|AF245377.1| | 240016 | g118498 | i0 | 90.749 | 208.639344262295 | 227 | 21 | 74 | 0 | 1 | 227 | 941 | 715 | Verrucomicrobium spinosum 23S ribosomal RNA gene, partial sequence | blastn | 63635 | 303 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium spinosum | |
| 18523030 | 18523030 | PRJNA690592_S_NODE_147735_length_279_cov_1.121359_g146721_i0 | PRJNA690592 | 147735 | 279 | 1.121359 | 3.12859161 | Prosthecobacter debontii | 48467 | Bacteria | Bacteria | 366 | 8.08e-97 | NTclustered | gi|164510703|emb|AJ966882.1| | 48467 | g146721 | i0 | 96 | 224.58064516129 | 225 | 9 | 81 | 0 | 55 | 279 | 4243 | 4467 | Prosthecobacter debontii 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ala gene, tRNA-Ile gene and ITS1, strain DSM 14044 | blastn | 62658 | 366 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter debontii | |
| 18523964 | 18523964 | PRJNA690592_S_NODE_7255_length_1037_cov_3.536307_g6632_i0 | PRJNA690592 | 7255 | 1037 | 3.536307 | 36.67150359 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 58.4 | 0.002 | NTclustered | gi|1888387165|gb|CP058562.1| | 239935 | g6632 | i0 | 97.059 | 1.14850530376085 | 34 | 1 | 3 | 0 | 135 | 168 | 1958297 | 1958264 | Akkermansia muciniphila strain AK32 chromosome, complete genome | blastn | 1191 | 58.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 19798029 | 19798029 | PRJNA690592_S_NODE_159836_length_269_cov_1.571429_g158822_i0 | PRJNA690592 | 159836 | 269 | 1.571429 | 4.22714401 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|2874253712|emb|OY969554.1| | 174324 | g158822 | i0 | 100 | 0.107806691449814 | 29 | 0 | 11 | 0 | 183 | 211 | 822741 | 822713 | MAG: uncultured Chlamydiales bacterium isolate MFD04540.bin.c.3 genome assembly, chromosome: 1 | blastn | 29 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 19798138 | 19798138 | PRJNA690592_S_NODE_176116_length_257_cov_1.847826_g175102_i0 | PRJNA690592 | 176116 | 257 | 1.847826 | 4.74891282 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 289 | 1.64e-73 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g175102 | i0 | 88.655 | 147.988326848249 | 238 | 26 | 93 | 1 | 1 | 238 | 2001635 | 2001871 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 38033 | 289 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 22349227 | 22349227 | PRJNA690592_S_NODE_62898_length_398_cov_1.418462_g61884_i0 | PRJNA690592 | 62898 | 398 | 1.418462 | 5.64547876 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 558 | 1.84e-154 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g61884 | i0 | 92 | 112.379396984925 | 400 | 28 | 100 | 4 | 1 | 398 | 1728429 | 1728826 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 44727 | 558 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 24130851 | 24130851 | PRJNA690592_S_NODE_14719_length_767_cov_1.717579_g13835_i0 | PRJNA690592 | 14719 | 767 | 1.717579 | 13.17383093 | Engelhardtia | 139931 | Bacteria | Bacteria | 54.7 | 0.021 | NTclustered | gi|1712638177|gb|CP036287.1| | 2528011 | g13835 | i0 | 100 | 0.075619295958279 | 29 | 0 | 4 | 0 | 132 | 160 | 304603 | 304575 | Planctomycetes bacterium Pla133 chromosome, complete genome | blastn | 58 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Engelhardtia | Engelhardtia mirabilis | |||
| 24897515 | 24897515 | PRJNA690592_S_NODE_185360_length_251_cov_1.556180_g184346_i0 | PRJNA690592 | 185360 | 251 | 1.55618 | 3.9060118 | Lacipirellula parvula | 2650471 | Bacteria | Bacteria | 122 | 1.7099999999999998e-23 | NTclustered | gi|1761017769|dbj|AP021861.1| | 2650471 | g184346 | i0 | 83.969 | 7.1394422310757 | 131 | 17 | 51 | 3 | 123 | 251 | 2454744 | 2454616 | Lacipirellula parvula PX69 DNA, complete genome | blastn | 1792 | 122 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Lacipirellula | Lacipirellula parvula | |
| 24898438 | 24898438 | PRJNA690592_S_NODE_97620_length_331_cov_1.069767_g96606_i0 | PRJNA690592 | 97620 | 331 | 1.069767 | 3.54092877 | Isosphaera pallida | 128 | Bacteria | Bacteria | 65.8 | 4e-6 | NTclustered | gi|319748837|gb|CP002353.1| | 575540 | g96606 | i0 | 91.489 | 1.62235649546828 | 47 | 4 | 14 | 0 | 129 | 175 | 1374069 | 1374115 | Isosphaera pallida ATCC 43644, complete genome | blastn | 537 | 65.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaera | Isosphaera pallida | |
| 25405420 | 25405420 | PRJNA690592_S_NODE_143700_length_282_cov_1.473684_g142686_i0 | PRJNA690592 | 143700 | 282 | 1.473684 | 4.15578888 | Fontisphaera | 3050007 | Bacteria | Bacteria | 309 | 1.4e-79 | NTclustered | gi|2621704341|emb|OY760937.1| | 2499141 | g142686 | i0 | 86.572 | 76.2198581560284 | 283 | 35 | 100 | 3 | 1 | 282 | 3991663 | 3991943 | MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1 | blastn | 21494 | 309 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;