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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA690592" and tax_clade = "Metamonada"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Metamonada · 14 ✖

bioproject 1

  • PRJNA690592 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
670855 670855 PRJNA690592_S_NODE_123621_length_300_cov_6.964758_g122607_i0 PRJNA690592 123621 300 6.964758 20.894274 Ergobibamus cyprinoides 926446 Fornicata other_Eukaryota 355 1.9e-93   NTclustered gi|339759383|dbj|AB600304.1| 926446 g122607 i0 88 99.4533333333333 300 36 100 0 1 300 81 380 Ergobibamus cyprinoides gene for translation elongation factor 1 alpha, complete cds, strain: CL blastn 29836 355 1 Eukaryota Metamonada   Fornicata       Ergobibamus Ergobibamus cyprinoides
4499221 4499221 PRJNA690592_S_NODE_168944_length_262_cov_1.984127_g167930_i0 PRJNA690592 168944 262 1.984127 5.19841274 Holomastigotes sp. 3086161 Parabasalia other_Eukaryota 60.2 1.43e-4   NTclustered gi|2637867514|gb|OR995879.1| 3086161 g167930 i0 89.362 0.179389312977099 47 5 18 0 1 47 2054 2008 Holomastigotes sp. clone Hsjo_Para28S_sq53sz61 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 47 60.2 1 Eukaryota Metamonada   Parabasalia   Spirotrichonymphida Holomastigotoididae Holomastigotes Holomastigotes sp.
5775589 5775589 PRJNA690592_S_NODE_85405_length_349_cov_1.949275_g84391_i0 PRJNA690592 85405 349 1.949275 6.80296975 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.033   NTclustered gi|2794967814|ref|XM_067877569.1| 2049356 g84391 i0 100 0.0802292263610315 28 0 8 0 263 290 2746 2773 Monocercomonoides exilis putative CLIP-associating protein 1/2 (MONOS_7255), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
8324402 8324402 PRJNA690592_S_NODE_186507_length_251_cov_0.865169_g185493_i0 PRJNA690592 186507 251 0.865169 2.17157419 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 54.7 0.006   NTclustered gi|123449826|ref|XM_001313628.1| 412133 g185493 i0 96.875 0.796812749003984 32 1 13 0 159 190 922 953 Trichomonas vaginalis G3 experimental autoimmune prostatitis antigen 2-related family (TVAGG3_0762120), partial mRNA blastn 200 54.7 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
10875680 10875680 PRJNA690592_S_NODE_28389_length_566_cov_2.028398_g27391_i0 PRJNA690592 28389 566 2.028398 11.48073268 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 56.5 0.004   NTclustered gi|2794976622|ref|XM_067880051.1| 2049356 g27391 i0 90.698 0.0759717314487632 43 2 7 2 26 66 1580 1538 Monocercomonoides exilis uncharacterized protein (MONOS_9540), partial mRNA blastn 43 56.5 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
12151235 12151235 PRJNA690592_S_NODE_7870_length_1003_cov_2.905376_g7211_i0 PRJNA690592 7870 1003 2.905376 29.14092128 uncultured Oxymonadida sp. 413579 Preaxostyla other_Eukaryota 606 1.7299999999999991e-168   NTclustered gi|119117152|gb|DQ925217.1| 413579 g7211 i0 79 80.1774675972084 900 179 89 10 109 1003 906 12 Unidentified Oxymonadida clone R11 alpha-tubulin (Atub) mRNA, partial cds blastn 80418 606 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida     uncultured Oxymonadida sp.
14700608 14700608 PRJNA690592_S_NODE_33112_length_528_cov_2.285714_g32105_i0 PRJNA690592 33112 528 2.285714 12.06856992 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 56.5 0.004   NTclustered gi|2794963199|ref|XM_067874872.1| 2049356 g32105 i0 100 0.0568181818181818 30 0 6 0 212 241 10117 10146 Monocercomonoides exilis putative E3 ubiquitin-protein ligase UBR4 (MONOS_4774), partial mRNA blastn 30 56.5 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
16481856 16481856 PRJNA690592_S_NODE_204713_length_244_cov_7.707602_g203699_i0 PRJNA690592 204713 244 7.707602 18.80654888 Carpediemonas 201152 Fornicata other_Eukaryota 268 2.01e-67   NTclustered gi|339759347|dbj|AB600286.1| 797132 g203699 i0 86.777 75.8360655737705 242 30 99 2 1 241 44 284 Carpediemonas sp. NY0171 gene for beta-tubulin, partial cds blastn 18504 270 0.992592592592593 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas sp. NY0171
17756801 17756801 PRJNA690592_S_NODE_135074_length_290_cov_0.926267_g134060_i0 PRJNA690592 135074 290 0.926267 2.6861743 Monocercomonoides 302781 Preaxostyla other_Eukaryota 139 1.9999999999999997e-28   NTclustered gi|156708131|gb|EF474123.1| 302782 g134060 i0 86.923 15.4965517241379 130 10 43 6 167 290 1127 999 Monocercomonoides sp. PA clone 4/4 tubulin alpha subunit mRNA, complete cds blastn 4494 139 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides sp. PA
18523648 18523648 PRJNA690592_S_NODE_31215_length_543_cov_1.470213_g30209_i0 PRJNA690592 31215 543 1.470213 7.98325659 Ergobibamus cyprinoides 926446 Fornicata other_Eukaryota 399 1.6499999999999998e-106   NTclustered gi|339759377|dbj|AB600301.1| 926446 g30209 i0 80.218 92.6077348066298 551 93 100 13 1 543 731 1273 Ergobibamus cyprinoides gene for beta-tubulin, partial cds, strain: CL blastn 50286 399 1 Eukaryota Metamonada   Fornicata       Ergobibamus Ergobibamus cyprinoides
19798797 19798797 PRJNA690592_S_NODE_60576_length_404_cov_2.386707_g59562_i0 PRJNA690592 60576 404 2.386707 9.64229628 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 62.1 6.44e-5   NTclustered gi|2794959016|ref|XM_067877066.1| 2049356 g59562 i0 97.222 6.76980198019802 36 1 9 0 105 140 2578 2543 Monocercomonoides exilis putative Tat-binding 7 (MONOS_6802), partial mRNA blastn 2735 62.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
22349144 22349144 PRJNA690592_S_NODE_50398_length_438_cov_1.230137_g49384_i0 PRJNA690592 50398 438 1.230137 5.38800006 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 54.7 0.012   NTclustered gi|2806459186|ref|XM_068503837.1| 1144522 g49384 i0 96.97 0.0753424657534247 33 0 8 1 155 187 581 550 Tritrichomonas foetus uncharacterized protein (TRFO_24591), partial mRNA blastn 33 54.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
24897553 24897553 PRJNA690592_S_NODE_189020_length_250_cov_1.129944_g188006_i0 PRJNA690592 189020 250 1.129944 2.82486 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 63.9 1.05e-5   NTclustered gi|2794951304|ref|XM_067875723.1| 2049356 g188006 i0 97.297 3.78 37 1 15 0 214 250 2133 2097 Monocercomonoides exilis uncharacterized protein (MONOS_5563), partial mRNA blastn 945 63.9 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
24898031 24898031 PRJNA690592_S_NODE_4440_length_1254_cov_11.453006_g3983_i0 PRJNA690592 4440 1254 11.453006 143.62069524 Trimastix marina 137419 Preaxostyla other_Eukaryota 819 0   NTclustered gi|84105378|gb|DQ295217.1| 137419 g3983 i0 79.859 91.5558213716108 1132 218 90 10 1 1127 1134 8 Trimastix marina alpha tubulin 1 gene, partial cds blastn 114811 819 1 Eukaryota Metamonada   Preaxostyla     Trimastigidae Trimastix Trimastix marina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;