RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA690592" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA690592 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5775610 5775610 PRJNA690592_S_NODE_88825_length_344_cov_0.952030_g87811_i0 PRJNA690592 88825 344 0.95203 3.2749832 Thecamonas trahens 529818 Root_unresolved Root_unresolved 211 5.07e-50   NTclustered gi|923122580|ref|XM_013899306.1| 461836 g87811 i0 82.449 49.328488372093 245 39 71 4 100 342 114 356 Thecamonas trahens ATCC 50062 heat shock protein 90A (AMSG_09389), mRNA blastn 16969 211 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
9599791 9599791 PRJNA690592_S_NODE_186108_length_251_cov_1.151685_g185094_i0 PRJNA690592 186108 251 1.151685 2.89072935 Thecamonas trahens 529818 Root_unresolved Root_unresolved 60.2 1.36e-4   NTclustered gi|923128884|ref|XM_013902455.1| 461836 g185094 i0 97.143 0.262948207171315 35 1 14 0 123 157 3665 3699 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_05506), mRNA blastn 66 60.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
10875912 10875912 PRJNA690592_S_NODE_5969_length_1119_cov_10.068834_g5411_i0 PRJNA690592 5969 1119 10.068834 112.67025246 Thecamonas trahens 529818 Root_unresolved Root_unresolved 420 2.709999999999999e-112   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g5411 i0 76.764 14.8141197497766 822 147 71 31 202 1001 997 198 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 16577 420 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
17249601 17249601 PRJNA690592_S_NODE_39794_length_485_cov_5.905340_g38781_i0 PRJNA690592 39794 485 5.90534 28.640899 Thecamonas trahens 529818 Root_unresolved Root_unresolved 202 4.439999999999999e-47   NTclustered gi|923125359|ref|XM_013900694.1| 461836 g38781 i0 81.395 36.3649484536082 258 38 52 8 29 281 529 277 Thecamonas trahens ATCC 50062 calmodulin (AMSG_07687), mRNA blastn 17637 202 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;