contig_metadata
20 rows where analysis = "blastn", bioproject = "PRJNA690234" and tax_phylum = "Platyhelminthes"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 670524 | 670524 | PRJNA690234_P_NODE_8981_length_427_cov_1.672316_g8615_i0 | PRJNA690234 | 8981 | 427 | 1.672316 | 7.14078932 | Opisthorchis viverrini | 6198 | Platyhelminthes | Platyhelminthes | 442 | 2.089999999999999e-119 | NTclustered | gi|684391908|ref|XM_009171858.1| | 6198 | g8615 | i0 | 85.579 | 1.25058548009368 | 423 | 59 | 99 | 2 | 1 | 422 | 861 | 440 | Opisthorchis viverrini hypothetical protein partial mRNA | blastn | 534 | 442 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Opisthorchiida | Opisthorchiidae | Opisthorchis | Opisthorchis viverrini | |
| 3220735 | 3220735 | PRJNA690234_P_NODE_10323_length_397_cov_1.382716_g9957_i0 | PRJNA690234 | 10323 | 397 | 1.382716 | 5.48938252 | Opisthorchis viverrini | 6198 | Platyhelminthes | Platyhelminthes | 422 | 2.51e-113 | NTclustered | gi|684370736|ref|XM_009165286.1| | 6198 | g9957 | i0 | 89.286 | 0.846347607052897 | 336 | 36 | 85 | 0 | 1 | 336 | 336 | 1 | Opisthorchis viverrini hypothetical protein partial mRNA | blastn | 336 | 422 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Opisthorchiida | Opisthorchiidae | Opisthorchis | Opisthorchis viverrini | |
| 7048681 | 7048681 | PRJNA690234_P_NODE_19846_length_285_cov_1.160377_g19479_i0 | PRJNA690234 | 19846 | 285 | 1.160377 | 3.30707445 | Schistosoma mansoni | 6183 | Platyhelminthes | Platyhelminthes | 104 | 7.17e-18 | NTclustered | gi|1369885|gb|L78441.1|SCM14332R | 6183 | g19479 | i0 | 78.652 | 0.624561403508772 | 178 | 22 | 59 | 10 | 8 | 175 | 865 | 694 | Schistosoma mansoni 14-3-3-2 mRNA, 3' end of cds | blastn | 178 | 104 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Strigeidida | Schistosomatidae | Schistosoma | Schistosoma mansoni | |
| 7048847 | 7048847 | PRJNA690234_P_NODE_27326_length_249_cov_1.329545_g26959_i0 | PRJNA690234 | 27326 | 249 | 1.329545 | 3.31056705 | Opisthorchis viverrini | 6198 | Platyhelminthes | Platyhelminthes | 235 | 2.08e-57 | NTclustered | gi|684392139|ref|XM_009171929.1| | 6198 | g26959 | i0 | 87.379 | 0.827309236947791 | 206 | 25 | 82 | 1 | 22 | 226 | 1234 | 1029 | Opisthorchis viverrini hypothetical protein partial mRNA | blastn | 206 | 235 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Opisthorchiida | Opisthorchiidae | Opisthorchis | Opisthorchis viverrini | |
| 8323127 | 8323127 | PRJNA690234_P_NODE_16467_length_313_cov_1.950000_g16100_i0 | PRJNA690234 | 16467 | 313 | 1.95 | 6.1035 | Opisthorchis viverrini | 6198 | Platyhelminthes | Platyhelminthes | 174 | 5.99e-39 | NTclustered | gi|684365574|ref|XM_009163662.1| | 6198 | g16100 | i0 | 80.851 | 0.750798722044728 | 235 | 34 | 72 | 4 | 87 | 310 | 790 | 1024 | Opisthorchis viverrini hypothetical protein partial mRNA | blastn | 235 | 174 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Opisthorchiida | Opisthorchiidae | Opisthorchis | Opisthorchis viverrini | |
| 9598495 | 9598495 | PRJNA690234_P_NODE_14708_length_331_cov_1.596899_g14341_i0 | PRJNA690234 | 14708 | 331 | 1.596899 | 5.28573569 | Opisthorchis viverrini | 6198 | Platyhelminthes | Platyhelminthes | 309 | 1.68e-79 | NTclustered | gi|684398119|ref|XM_009173806.1| | 6198 | g14341 | i0 | 84.918 | 4.55287009063444 | 305 | 46 | 92 | 0 | 25 | 329 | 863 | 559 | Opisthorchis viverrini hypothetical protein partial mRNA | blastn | 1507 | 309 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Opisthorchiida | Opisthorchiidae | Opisthorchis | Opisthorchis viverrini | |
| 10874251 | 10874251 | PRJNA690234_P_NODE_25709_length_252_cov_0.871508_g25342_i0 | PRJNA690234 | 25709 | 252 | 0.871508 | 2.19620016 | Opisthorchis viverrini | 6198 | Platyhelminthes | Platyhelminthes | 104 | 6.22e-18 | NTclustered | gi|684393807|ref|XM_009172444.1| | 6198 | g25342 | i0 | 90.909 | 0.305555555555556 | 77 | 7 | 31 | 0 | 32 | 108 | 1660 | 1736 | Opisthorchis viverrini hypothetical protein partial mRNA | blastn | 77 | 104 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Opisthorchiida | Opisthorchiidae | Opisthorchis | Opisthorchis viverrini | |
| 10874446 | 10874446 | PRJNA690234_P_NODE_4549_length_613_cov_2.453704_g4190_i0 | PRJNA690234 | 4549 | 613 | 2.453704 | 15.04120552 | Opisthorchis viverrini | 6198 | Platyhelminthes | Platyhelminthes | 394 | 8.76e-105 | NTclustered | gi|684406876|ref|XM_009176659.1| | 6198 | g4190 | i0 | 82.658 | 7.02610114192496 | 444 | 77 | 72 | 0 | 170 | 613 | 746 | 303 | Opisthorchis viverrini hypothetical protein partial mRNA | blastn | 4307 | 394 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Opisthorchiida | Opisthorchiidae | Opisthorchis | Opisthorchis viverrini | |
| 10874537 | 10874537 | PRJNA690234_P_NODE_8789_length_432_cov_2.075209_g8423_i0 | PRJNA690234 | 8789 | 432 | 2.075209 | 8.96490288 | Opisthorchis viverrini | 6198 | Platyhelminthes | Platyhelminthes | 335 | 3.7e-87 | NTclustered | gi|684407923|ref|XM_009176992.1| | 6198 | g8423 | i0 | 83.198 | 13 | 369 | 59 | 85 | 3 | 55 | 420 | 224 | 592 | Opisthorchis viverrini hypothetical protein partial mRNA | blastn | 5616 | 335 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Opisthorchiida | Opisthorchiidae | Opisthorchis | Opisthorchis viverrini | |
| 12149752 | 12149752 | PRJNA690234_P_NODE_6570_length_504_cov_2.313225_g6205_i0 | PRJNA690234 | 6570 | 504 | 2.313225 | 11.658654 | Fasciola hepatica | 6192 | Platyhelminthes | Platyhelminthes | 276 | 2.69e-69 | NTclustered | gi|262213551|gb|GU059940.1| | 6192 | g6205 | i0 | 82.298 | 3.36706349206349 | 322 | 54 | 64 | 3 | 2 | 322 | 491 | 172 | Fasciola hepatica myosin regulatory light chain mRNA, complete cds | blastn | 1697 | 276 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Plagiorchiida | Fasciolidae | Fasciola | Fasciola hepatica | |
| 13423897 | 13423897 | PRJNA690234_P_NODE_18451_length_295_cov_1.405405_g18084_i0 | PRJNA690234 | 18451 | 295 | 1.405405 | 4.14594475 | Opisthorchis viverrini | 6198 | Platyhelminthes | Platyhelminthes | 204 | 7.139999999999998e-48 | NTclustered | gi|684371787|ref|XM_009165626.1| | 6198 | g18084 | i0 | 79.381 | 0.986440677966102 | 291 | 58 | 98 | 2 | 6 | 295 | 890 | 601 | Opisthorchis viverrini hypothetical protein partial mRNA | blastn | 291 | 204 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Opisthorchiida | Opisthorchiidae | Opisthorchis | Opisthorchis viverrini | |
| 15973171 | 15973171 | PRJNA690234_P_NODE_5133_length_576_cov_1.439364_g4771_i0 | PRJNA690234 | 5133 | 576 | 1.439364 | 8.29073664 | Opisthorchis viverrini | 6198 | Platyhelminthes | Platyhelminthes | 457 | 1.03e-123 | NTclustered | gi|684403082|ref|XM_009175419.1| | 6198 | g4771 | i0 | 81.636 | 13.2916666666667 | 550 | 101 | 95 | 0 | 23 | 572 | 114 | 663 | Opisthorchis viverrini hypothetical protein partial mRNA | blastn | 7656 | 457 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Opisthorchiida | Opisthorchiidae | Opisthorchis | Opisthorchis viverrini | |
| 15973251 | 15973251 | PRJNA690234_P_NODE_9253_length_420_cov_2.481268_g8887_i0 | PRJNA690234 | 9253 | 420 | 2.481268 | 10.4213256 | Opisthorchis viverrini | 6198 | Platyhelminthes | Platyhelminthes | 283 | 1.32e-71 | NTclustered | gi|684398518|ref|XM_009173939.1| | 6198 | g8887 | i0 | 79.744 | 0.928571428571429 | 390 | 79 | 93 | 0 | 31 | 420 | 1 | 390 | Opisthorchis viverrini hypothetical protein partial mRNA | blastn | 390 | 283 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Opisthorchiida | Opisthorchiidae | Opisthorchis | Opisthorchis viverrini | |
| 17248129 | 17248129 | PRJNA690234_P_NODE_25734_length_252_cov_0.871508_g25367_i0 | PRJNA690234 | 25734 | 252 | 0.871508 | 2.19620016 | Clonorchis sinensis | 79923 | Platyhelminthes | Platyhelminthes | 326 | 1.22e-84 | NTclustered | gi|209402524|gb|EU780135.1| | 79923 | g25367 | i0 | 90.947 | 103.06746031746 | 243 | 21 | 96 | 1 | 1 | 243 | 1016 | 775 | Clonorchis sinensis clone ACP-2D-70 | blastn | 25973 | 326 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Opisthorchiida | Opisthorchiidae | Clonorchis | Clonorchis sinensis | |
| 17248385 | 17248385 | PRJNA690234_P_NODE_8454_length_441_cov_1.380435_g8088_i0 | PRJNA690234 | 8454 | 441 | 1.380435 | 6.08771835 | Schistosoma haematobium | 6185 | Platyhelminthes | Platyhelminthes | 259 | 2.34e-64 | NTclustered | gi|2318774665|ref|XM_051218133.1| | 6185 | g8088 | i0 | 77.83 | 1.92290249433107 | 424 | 90 | 96 | 4 | 2 | 423 | 930 | 1351 | Schistosoma haematobium Calponin-3, variant 2 (CNN3_3), mRNA | blastn | 848 | 259 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Strigeidida | Schistosomatidae | Schistosoma | Schistosoma haematobium | |
| 18522451 | 18522451 | PRJNA690234_P_NODE_5895_length_533_cov_3.095652_g5532_i0 | PRJNA690234 | 5895 | 533 | 3.095652 | 16.49982516 | Clonorchis sinensis | 79923 | Platyhelminthes | Platyhelminthes | 368 | 4.57e-97 | NTclustered | gi|1837630629|gb|MT292217.1| | 79923 | g5532 | i0 | 79.444 | 86.4127579737336 | 540 | 96 | 100 | 11 | 1 | 533 | 7913 | 7382 | Clonorchis sinensis isolate Cs138 mitochondrion, partial genome | blastn | 46058 | 368 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Opisthorchiida | Opisthorchiidae | Clonorchis | Clonorchis sinensis | |
| 19797278 | 19797278 | PRJNA690234_P_NODE_30856_length_243_cov_1.558824_g30489_i0 | PRJNA690234 | 30856 | 243 | 1.558824 | 3.78794232 | Echinostoma miyagawai | 1579201 | Platyhelminthes | Platyhelminthes | 209 | 1.23e-49 | NTclustered | gi|1727111759|gb|MN116740.1| | 1579201 | g30489 | i0 | 83.333 | 14.9794238683128 | 228 | 36 | 93 | 2 | 10 | 236 | 5268 | 5494 | Echinostoma miyagawai isolate Hunan mitochondrion, complete genome | blastn | 3640 | 209 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Plagiorchiida | Echinostomatidae | Echinostoma | Echinostoma miyagawai | |
| 22347315 | 22347315 | PRJNA690234_P_NODE_13798_length_341_cov_2.037313_g13431_i0 | PRJNA690234 | 13798 | 341 | 2.037313 | 6.94723733 | Opisthorchis viverrini | 6198 | Platyhelminthes | Platyhelminthes | 285 | 2.92e-72 | NTclustered | gi|684370736|ref|XM_009165286.1| | 6198 | g13431 | i0 | 83.66 | 0.897360703812317 | 306 | 46 | 90 | 4 | 1 | 306 | 559 | 860 | Opisthorchis viverrini hypothetical protein partial mRNA | blastn | 306 | 285 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Opisthorchiida | Opisthorchiidae | Opisthorchis | Opisthorchis viverrini | |
| 24896525 | 24896525 | PRJNA690234_P_NODE_28240_length_248_cov_0.891429_g27873_i0 | PRJNA690234 | 28240 | 248 | 0.891429 | 2.21074392 | Cryptocotyle lingua | 66766 | Platyhelminthes | Platyhelminthes | 309 | 1.21e-79 | NTclustered | gi|1964739281|gb|MW361175.1| | 66766 | g27873 | i0 | 89.958 | 11.2298387096774 | 239 | 24 | 96 | 0 | 9 | 247 | 132 | 370 | Cryptocotyle lingua Ras-related protein rab7 (RAB7A) mRNA, complete cds | blastn | 2785 | 309 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Opisthorchiida | Heterophyidae | Cryptocotyle | Cryptocotyle lingua | |
| 25405308 | 25405308 | PRJNA690234_P_NODE_1820_length_979_cov_120.354305_g1563_i0 | PRJNA690234 | 1820 | 979 | 120.354305 | 1178.26864595 | Opisthorchiidae | 6196 | Platyhelminthes | Platyhelminthes | 604 | 6.069999999999998e-168 | NTclustered | gi|937546747|ref|NC_028008.1| | 674132 | g1563 | i0 | 78.71 | 59.0480081716037 | 977 | 157 | 97 | 45 | 18 | 968 | 8565 | 9516 | Metorchis orientalis mitochondrion, complete genome | blastn | 57808 | 604 | 1 | Eukaryota | Opisthokonta | Metazoa | Platyhelminthes | Trematoda | Opisthorchiida | Opisthorchiidae | Metorchis | Metorchis orientalis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;