RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA690234" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA690234 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10874456 10874456 PRJNA690234_P_NODE_489_length_1684_cov_47.582247_g368_i0 PRJNA690234 489 1684 47.582247 801.28503948 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 747 0   NTclustered gi|2522768008|gb|OR162445.1| 646526 g368 i0 85.027 13.8782660332542 748 96 92 16 927 1666 2468 1729 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23371 747 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
13423834 13423834 PRJNA690234_P_NODE_15111_length_326_cov_9.292490_g14744_i0 PRJNA690234 15111 326 9.29249 30.2935174 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 532 8.979999999999998e-147   NTclustered gi|2522768008|gb|OR162445.1| 646526 g14744 i0 96.061 32.8834355828221 330 8 100 3 1 326 3660 3988 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 10720 532 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
17248051 17248051 PRJNA690234_P_NODE_22474_length_267_cov_13.345361_g22107_i0 PRJNA690234 22474 267 13.345361 35.63211387 Glugoides intestinalis 174680 Fungi Fungi 148 3.0299999999999998e-31   NTclustered gi|113470857|gb|DQ680158.2| 174680 g22107 i0 79.535 19.7865168539326 215 39 79 5 1 212 1760 1972 Glugoides intestinalis isolate Gi3 23S ribosomal RNA gene, partial sequence; 23S-16S ribosomal RNA spacer, complete sequence; and 16S ribosomal RNA gene, partial sequence blastn 5283 148 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Glugoides Glugoides intestinalis
17248390 17248390 PRJNA690234_P_NODE_894_length_1351_cov_9.708138_g717_i0 PRJNA690234 894 1351 9.708138 131.15694438 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 1456 0   NTclustered gi|2522768008|gb|OR162445.1| 646526 g717 i0 89.569 79.359733530718 1160 104 85 13 4 1152 1291 138 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 107215 1456 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;