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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA690234" and tax_clade = "Sar"

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tax_phylum 4

tax_superkingdom 1

tax_clade 1

  • Sar · 14 ✖

bioproject 1

  • PRJNA690234 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2454147 2454147 PRJNA690234_P_NODE_8822_length_431_cov_2.824022_g8456_i0 PRJNA690234 8822 431 2.824022 12.17153482 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.012   NTclustered gi|817746583|ref|XM_012482823.1| 5857 g8456 i0 100 0.134570765661253 29 0 7 0 402 430 1241 1213 Plasmodium fragile uncharacterized protein (AK88_05221), partial mRNA blastn 58 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium fragile
3221206 3221206 PRJNA690234_P_NODE_30903_length_243_cov_1.376471_g30536_i0 PRJNA690234 30903 243 1.376471 3.34482453 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.022   NTclustered gi|829187266|ref|XM_001033288.2| 312017 g30536 i0 100 0.11522633744856 28 0 12 0 129 156 1611 1584 Tetrahymena thermophila SB210 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
4498225 4498225 PRJNA690234_P_NODE_24024_length_258_cov_2.627027_g23657_i0 PRJNA690234 24024 258 2.627027 6.77772966 Mallomonas asmundiae 64709 SAR_Eukaryotes SAR_Eukaryotes 329 9.689999999999998e-86   NTclustered gi|16326554|gb|AF409122.1| 64709 g23657 i0 89.655 17.4728682170543 261 23 100 4 1 258 3637 3896 Mallomonas asmundae internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 4508 329 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Mallomonas Mallomonas asmundiae
7048712 7048712 PRJNA690234_P_NODE_21026_length_276_cov_2.729064_g20659_i0 PRJNA690234 21026 276 2.729064 7.53221664 Philasterides dicentrarchi 282688 SAR_Eukaryotes SAR_Eukaryotes 143 1.46e-29   NTclustered gi|49616744|gb|AY643504.1| 282688 g20659 i0 84.459 1.68840579710145 148 20 53 3 1 146 247 101 Philasterides dicentrarchi 26S ribosomal RNA gene, partial sequence blastn 466 143 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Philasteridae Philasterides Philasterides dicentrarchi
8831831 8831831 PRJNA690234_P_NODE_33047_length_201_cov_11.632812_g32680_i0 PRJNA690234 33047 201 11.632812 23.38195212 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 372 1.18e-98   NTclustered gi|2065561668|gb|MZ540265.1| 44029 g32680 i0 100 99.9950248756219 201 0 100 0 1 201 1380 1580 Paramecium jenningsi isolate UR02 small subunit ribosomal RNA gene, partial sequence blastn 20099 372 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium jenningsi
9598493 9598493 PRJNA690234_P_NODE_14608_length_332_cov_1.729730_g14241_i0 PRJNA690234 14608 332 1.72973 5.7427036 Synura synuroidea 47573 SAR_Eukaryotes SAR_Eukaryotes 222 2.25e-53   NTclustered gi|11466457|ref|NC_002174.1| 47573 g14241 i0 79.456 68.8524096385542 331 55 98 11 7 332 1008 686 Chrysodidymus synuroideus mitochondrion, complete genome blastn 22859 222 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Synura Synura synuroidea
12149634 12149634 PRJNA690234_P_NODE_30210_length_244_cov_1.555556_g29843_i0 PRJNA690234 30210 244 1.555556 3.79555664 Synura synuroidea 47573 SAR_Eukaryotes SAR_Eukaryotes 102 2.15e-17   NTclustered gi|11466457|ref|NC_002174.1| 47573 g29843 i0 88.372 0.352459016393443 86 9 35 1 1 85 1090 1175 Chrysodidymus synuroideus mitochondrion, complete genome blastn 86 102 1 Eukaryota Sar     Synurophyceae Synurales Mallomonadaceae Synura Synura synuroidea
15972908 15972908 PRJNA690234_P_NODE_2333_length_860_cov_16.968234_g2033_i0 PRJNA690234 2333 860 16.968234 145.9268124 Ochromonas sp. SAG 933.10 984272 SAR_Eukaryotes SAR_Eukaryotes 1356 0   NTclustered gi|323690578|gb|GU935637.1| 984272 g2033 i0 95.145 84.2162790697674 865 33 100 7 1 860 2001 1141 Ochromonas sp. SAG 933.10 28S ribosomal RNA gene, partial sequence blastn 72426 1356 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Ochromonas Ochromonas sp. SAG 933.10
19797318 19797318 PRJNA690234_P_NODE_32716_length_228_cov_2.012903_g32349_i0 PRJNA690234 32716 228 2.012903 4.5894188400000004 Cryptosporidium felis 83540 SAR_Eukaryotes SAR_Eukaryotes 80.5 9.32e-11   NTclustered gi|833025125|gb|KP642067.1| 83540 g32349 i0 94.231 2.02631578947368 52 3 23 0 158 209 1846 1795 Cryptosporidium felis isolate SC142 heat shock protein 70 (HSP70) gene, partial cds blastn 462 80.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis
21581069 21581069 PRJNA690234_P_NODE_33057_length_200_cov_7.685039_g32690_i0 PRJNA690234 33057 200 7.685039 15.370078 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 370 4.22e-98   NTclustered gi|2295553597|gb|OP378946.1| 1117027 g32690 i0 100 100 200 0 100 0 1 200 1070 871 Poteriospumella lacustris isolate 1532 large subunit ribosomal RNA gene, partial sequence blastn 20000 370 1 Eukaryota Sar     Chrysophyceae Chromulinales Dinobryaceae Poteriospumella Poteriospumella lacustris
22347542 22347542 PRJNA690234_P_NODE_24158_length_258_cov_0.843243_g23791_i0 PRJNA690234 24158 258 0.843243 2.17556694 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 477 3.2699999999999985e-130   NTclustered gi|325194239|emb|FR825095.1| 890382 g23791 i0 100 103.81007751938 258 0 100 0 1 258 1180 923 Albugo laibachii Nc14, genomic contig CONTIG_1625_NC14_v4_1818_619 blastn 26783 477 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
22347638 22347638 PRJNA690234_P_NODE_28318_length_247_cov_1.816092_g27951_i0 PRJNA690234 28318 247 1.816092 4.48574724 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 270 5.659999999999999e-68   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g27951 i0 86.345 18.4048582995951 249 32 100 2 1 247 3746 3994 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 4546 270 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
22347733 22347733 PRJNA690234_P_NODE_32158_length_239_cov_5.036145_g31791_i0 PRJNA690234 32158 239 5.036145 12.03638655 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 250 7.099999999999999e-62   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g31791 i0 90.526 71.2133891213389 190 16 79 2 1 189 3685 3873 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 17020 250 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
24130740 24130740 PRJNA690234_P_NODE_15599_length_321_cov_7.629032_g15232_i0 PRJNA690234 15599 321 7.629032 24.48919272 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 588 1.8599999999999994e-163   NTclustered gi|2065561668|gb|MZ540265.1| 44029 g15232 i0 99.688 99.595015576324 321 1 100 0 1 321 332 12 Paramecium jenningsi isolate UR02 small subunit ribosomal RNA gene, partial sequence blastn 31970 593 0.991568296795953 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium jenningsi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;