contig_metadata
24 rows where analysis = "blastn", bioproject = "PRJNA690124" and tax_superkingdom = "Viruses"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 669279 | 669279 | PRJNA690124_P_NODE_34001_length_285_cov_1.103774_g33635_i0 | PRJNA690124 | 34001 | 285 | 1.103774 | 3.1457559 | Capillovirus mali | 28347 | Viruses | Viruses | 427 | 3.74e-115 | NTclustered | gi|1824676451|gb|MK481961.1| | 28347 | g33635 | i0 | 93.972 | 1.97894736842105 | 282 | 17 | 99 | 0 | 4 | 285 | 1734 | 1453 | Apple stem grooving virus isolate Ordos-7, complete genome | blastn | 564 | 427 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Capillovirus | Capillovirus mali | ||
| 669780 | 669780 | PRJNA690124_P_NODE_55701_length_242_cov_0.923077_g55335_i0 | PRJNA690124 | 55701 | 242 | 0.923077 | 2.23384634 | Capillovirus mali | 28347 | Viruses | Viruses | 364 | 2.4699999999999992e-96 | NTclustered | gi|1824676451|gb|MK481961.1| | 28347 | g55335 | i0 | 93.802 | 2 | 242 | 15 | 100 | 0 | 1 | 242 | 1467 | 1226 | Apple stem grooving virus isolate Ordos-7, complete genome | blastn | 484 | 364 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Capillovirus | Capillovirus mali | ||
| 1945227 | 1945227 | PRJNA690124_P_NODE_2_length_7254_cov_7.986631_g1_i0 | PRJNA690124 | 2 | 7254 | 7.986631 | 579.35021274 | Zebrafish picornavirus 1 | 2304617 | Viruses | Viruses | 11845 | 0 | NTclustered | gi|2500378199|ref|NC_076245.1| | 2304617 | g1 | i0 | 96.129 | 3.05707196029777 | 7260 | 275 | 100 | 4 | 1 | 7254 | 920 | 8179 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | blastn | 22176 | 11845 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Zebrafish picornavirus 1 | |||
| 1945755 | 1945755 | PRJNA690124_P_NODE_52442_length_245_cov_0.906977_g52076_i0 | PRJNA690124 | 52442 | 245 | 0.906977 | 2.22209365 | Foveavirus mali | 35350 | Viruses | Viruses | 283 | 7.2e-72 | NTclustered | gi|1229033421|gb|KY081217.1| | 35350 | g52076 | i0 | 93.651 | 9.60816326530612 | 189 | 12 | 77 | 0 | 57 | 245 | 1 | 189 | Foveavirus mali isolate YSH2 coat protein gene, complete cds | blastn | 2354 | 283 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Foveavirus | Foveavirus mali | ||
| 3220283 | 3220283 | PRJNA690124_P_NODE_3_length_7198_cov_46.612912_g2_i0 | PRJNA690124 | 3 | 7198 | 46.612912 | 3355.19740576 | Danio blood picornavirus/Zebrafish picornavirus 2 | 3063761 | Viruses | Viruses | 2839 | 0 | NTclustered | gi|2551699335|gb|OK619588.1| | 3063761 | g2 | i0 | 95.694 | 0.666157265907196 | 1765 | 73 | 67 | 3 | 1 | 1764 | 7091 | 5329 | Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds | blastn | 4795 | 2839 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Danio blood picornavirus/Zebrafish picornavirus 2 | |||
| 4497646 | 4497646 | PRJNA690124_P_NODE_48524_length_248_cov_1.320000_g48158_i0 | PRJNA690124 | 48524 | 248 | 1.32 | 3.2736 | Zebrafish picornavirus 1 | 2304617 | Viruses | Viruses | 418 | 1.9199999999999994e-112 | NTclustered | gi|2500378199|ref|NC_076245.1| | 2304617 | g48158 | i0 | 97.166 | 2.98790322580645 | 247 | 7 | 99 | 0 | 1 | 247 | 6851 | 7097 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | blastn | 741 | 418 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Zebrafish picornavirus 1 | |||
| 7047904 | 7047904 | PRJNA690124_P_NODE_3546_length_826_cov_8.289509_g3246_i0 | PRJNA690124 | 3546 | 826 | 8.289509 | 68.47134434 | Zebrafish picornavirus 1 | 2304617 | Viruses | Viruses | 1406 | 0 | NTclustered | gi|1990739381|tpg|BK011179.1| | 2304617 | g3246 | i0 | 97.455 | 2.87409200968523 | 825 | 19 | 99 | 2 | 1 | 824 | 2 | 825 | TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome | blastn | 2374 | 1406 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Zebrafish picornavirus 1 | |||
| 8322162 | 8322162 | PRJNA690124_P_NODE_22447_length_344_cov_1.583026_g22081_i0 | PRJNA690124 | 22447 | 344 | 1.583026 | 5.44560944 | Iflavirus betaspexiguae | 3048332 | Viruses | Viruses | 580 | 3.3599999999999993e-161 | NTclustered | gi|2895513713|tpg|BK068477.1| | 3048332 | g22081 | i0 | 97.093 | 5 | 344 | 10 | 100 | 0 | 1 | 344 | 7692 | 7349 | TPA_asm: Iflavirus betaspexiguae isolate WUR6 polyprotein gene, complete cds | blastn | 1720 | 580 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Iflaviridae | Iflavirus | Iflavirus betaspexiguae | ||
| 8322556 | 8322556 | PRJNA690124_P_NODE_40807_length_260_cov_1.593583_g40441_i0 | PRJNA690124 | 40807 | 260 | 1.593583 | 4.1433158 | Iflavirus betaspexiguae | 3048332 | Viruses | Viruses | 472 | 1.53e-128 | NTclustered | gi|2895513713|tpg|BK068477.1| | 3048332 | g40441 | i0 | 99.612 | 5.95384615384615 | 258 | 1 | 99 | 0 | 1 | 258 | 4181 | 3924 | TPA_asm: Iflavirus betaspexiguae isolate WUR6 polyprotein gene, complete cds | blastn | 1548 | 472 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Iflaviridae | Iflavirus | Iflavirus betaspexiguae | ||
| 10872920 | 10872920 | PRJNA690124_P_NODE_15069_length_415_cov_2.318713_g14703_i0 | PRJNA690124 | 15069 | 415 | 2.318713 | 9.62265895 | Iflavirus betaspexiguae | 3048332 | Viruses | Viruses | 680 | 0 | NTclustered | gi|612400726|gb|KJ186788.1| | 1228012 | g14703 | i0 | 96.368 | 6.9710843373494 | 413 | 15 | 99 | 0 | 3 | 415 | 8289 | 7877 | Spodoptera exigua iflavirus 2 from Spain, complete genome | blastn | 2893 | 680 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Iflaviridae | Iflavirus | Iflavirus betaspexiguae | ||
| 10872938 | 10872938 | PRJNA690124_P_NODE_15649_length_408_cov_1.994030_g15283_i0 | PRJNA690124 | 15649 | 408 | 1.99403 | 8.1356424 | Capillovirus mali | 28347 | Viruses | Viruses | 682 | 0 | NTclustered | gi|1824676484|gb|MK481972.1| | 28347 | g15283 | i0 | 96.814 | 43.9950980392157 | 408 | 13 | 100 | 0 | 1 | 408 | 3712 | 3305 | Apple stem grooving virus isolate Tibet-4, complete genome | blastn | 17950 | 682 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Capillovirus | Capillovirus mali | ||
| 10873901 | 10873901 | PRJNA690124_P_NODE_9_length_5347_cov_6.780812_g1_i1 | PRJNA690124 | 9 | 5347 | 6.780812 | 362.57001764 | Zebrafish picornavirus 1 | 2304617 | Viruses | Viruses | 8591 | 0 | NTclustered | gi|2500378199|ref|NC_076245.1| | 2304617 | g1 | i1 | 95.664 | 3.00224424911165 | 5350 | 229 | 100 | 3 | 1 | 5347 | 6269 | 920 | Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome | blastn | 16053 | 8591 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Picornaviridae | Zebrafish picornavirus 1 | |||
| 12148747 | 12148747 | PRJNA690124_P_NODE_42130_length_256_cov_0.945355_g41764_i0 | PRJNA690124 | 42130 | 256 | 0.945355 | 2.4201088 | Foveavirus mali | 35350 | Viruses | Viruses | 433 | 7.11e-117 | NTclustered | gi|526132482|gb|JX673872.1| | 35350 | g41764 | i0 | 97.255 | 7.921875 | 255 | 7 | 99 | 0 | 2 | 256 | 514 | 768 | Apple stem pitting virus clone HN-HM-20 TGB1, TGB2, and TGB3 genes, complete cds | blastn | 2028 | 433 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Foveavirus | Foveavirus mali | ||
| 12148966 | 12148966 | PRJNA690124_P_NODE_52450_length_245_cov_0.906977_g52084_i0 | PRJNA690124 | 52450 | 245 | 0.906977 | 2.22209365 | Trichovirus mali | 12175 | Viruses | Viruses | 276 | 1.21e-69 | NTclustered | gi|1810787445|gb|MK368730.1| | 12175 | g52084 | i0 | 87.045 | 5.96326530612245 | 247 | 28 | 100 | 4 | 1 | 245 | 2850 | 3094 | Apple chlorotic leaf spot virus isolate Shanxi_1, complete genome | blastn | 1461 | 276 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Trichovirus | Trichovirus mali | ||
| 13422909 | 13422909 | PRJNA690124_P_NODE_22911_length_341_cov_1.291045_g22545_i0 | PRJNA690124 | 22911 | 341 | 1.291045 | 4.40246345 | Capillovirus mali | 28347 | Viruses | Viruses | 558 | 1.56e-154 | NTclustered | gi|2219859828|gb|OM313335.1| | 28347 | g22545 | i0 | 96.188 | 100.105571847507 | 341 | 13 | 100 | 0 | 1 | 341 | 353 | 13 | Apple stem grooving virus isolate SD-Pb312-8S coat protein gene, complete cds | blastn | 34136 | 558 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Capillovirus | Capillovirus mali | ||
| 13423510 | 13423510 | PRJNA690124_P_NODE_50431_length_247_cov_0.896552_g50065_i0 | PRJNA690124 | 50431 | 247 | 0.896552 | 2.21448344 | Foveavirus mali | 35350 | Viruses | Viruses | 416 | 6.869999999999999e-112 | NTclustered | gi|526132506|gb|JX673878.1| | 35350 | g50065 | i0 | 99.134 | 39.9716599190283 | 231 | 2 | 94 | 0 | 17 | 247 | 1026 | 796 | Apple stem pitting virus clone LN-AP1-1 TGB1, TGB2, and TGB3 genes, complete cds | blastn | 9873 | 416 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Foveavirus | Foveavirus mali | ||
| 15972494 | 15972494 | PRJNA690124_P_NODE_57013_length_230_cov_2.070064_g56647_i0 | PRJNA690124 | 57013 | 230 | 2.070064 | 4.7611472 | Chrocagost virus | 3129398 | Viruses | Viruses | 337 | 5.059999999999998e-88 | NTclustered | gi|2717317482|gb|PP171846.1| | 3129398 | g56647 | i0 | 93.043 | 227.904347826087 | 230 | 16 | 100 | 0 | 1 | 230 | 5852 | 5623 | MAG: Chrocagost virus isolate CC1A_k141_84256 genomic sequence | blastn | 52418 | 337 | 1 | Viruses | Orthornavirae | Lenarviricota | Amabiliviricetes | Chrocagost virus | |||||
| 16481491 | 16481491 | PRJNA690124_P_NODE_50513_length_247_cov_0.896552_g50147_i0 | PRJNA690124 | 50513 | 247 | 0.896552 | 2.21448344 | Iflavirus | 232799 | Viruses | Viruses | 435 | 1.9e-117 | NTclustered | gi|612400726|gb|KJ186788.1| | 1228012 | g50147 | i0 | 98.381 | 7.75708502024291 | 247 | 4 | 100 | 0 | 1 | 247 | 4144 | 4390 | Spodoptera exigua iflavirus 2 from Spain, complete genome | blastn | 1916 | 435 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Iflaviridae | Iflavirus | Iflavirus betaspexiguae | ||
| 17247674 | 17247674 | PRJNA690124_P_NODE_56074_length_242_cov_0.923077_g55708_i0 | PRJNA690124 | 56074 | 242 | 0.923077 | 2.23384634 | Foveavirus mali | 35350 | Viruses | Viruses | 431 | 2.4e-116 | NTclustered | gi|2111969293|gb|MZ148040.1| | 35350 | g55708 | i0 | 98.76 | 8.70661157024793 | 242 | 3 | 100 | 0 | 1 | 242 | 5316 | 5075 | Foveavirus mali isolate 13TF175D, complete genome | blastn | 2107 | 431 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Foveavirus | Foveavirus mali | ||
| 17247680 | 17247680 | PRJNA690124_P_NODE_56254_length_242_cov_0.923077_g55888_i0 | PRJNA690124 | 56254 | 242 | 0.923077 | 2.23384634 | Iflavirus betaspexiguae | 3048332 | Viruses | Viruses | 398 | 2.4299999999999994e-106 | NTclustered | gi|612400726|gb|KJ186788.1| | 1228012 | g55888 | i0 | 96.281 | 5.99173553719008 | 242 | 9 | 100 | 0 | 1 | 242 | 5189 | 4948 | Spodoptera exigua iflavirus 2 from Spain, complete genome | blastn | 1450 | 398 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Iflaviridae | Iflavirus | Iflavirus betaspexiguae | ||
| 19796787 | 19796787 | PRJNA690124_P_NODE_8996_length_535_cov_1.458874_g8631_i0 | PRJNA690124 | 8996 | 535 | 1.458874 | 7.8049759 | Iflavirus betaspexiguae | 3048332 | Viruses | Viruses | 939 | 0 | NTclustered | gi|2895513713|tpg|BK068477.1| | 3048332 | g8631 | i0 | 98.318 | 5.99065420560748 | 535 | 9 | 100 | 0 | 1 | 535 | 6866 | 7400 | TPA_asm: Iflavirus betaspexiguae isolate WUR6 polyprotein gene, complete cds | blastn | 3205 | 939 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Iflaviridae | Iflavirus | Iflavirus betaspexiguae | ||
| 21071803 | 21071803 | PRJNA690124_P_NODE_37937_length_270_cov_1.335025_g37571_i0 | PRJNA690124 | 37937 | 270 | 1.335025 | 3.6045675 | Foveavirus mali | 35350 | Viruses | Viruses | 438 | 1.6299999999999993e-118 | NTclustered | gi|285804505|gb|FJ970954.1| | 35350 | g37571 | i0 | 95.926 | 99.5666666666667 | 270 | 11 | 100 | 0 | 1 | 270 | 623 | 354 | Apple stem pitting virus isolate 402ASP coat protein gene, partial cds | blastn | 26883 | 438 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Foveavirus | Foveavirus mali | ||
| 22346849 | 22346849 | PRJNA690124_P_NODE_44538_length_252_cov_0.871508_g44172_i0 | PRJNA690124 | 44538 | 252 | 0.871508 | 2.19620016 | Iflavirus betaspexiguae | 3048332 | Viruses | Viruses | 436 | 5.4e-118 | NTclustered | gi|591398028|ref|NC_023676.1| | 1228012 | g44172 | i0 | 98.008 | 5.99206349206349 | 251 | 5 | 99 | 0 | 1 | 251 | 34 | 284 | Spodoptera exigua iflavirus 2 isolate Korean, complete genome | blastn | 1510 | 436 | 1 | Viruses | Orthornavirae | Pisuviricota | Pisoniviricetes | Picornavirales | Iflaviridae | Iflavirus | Iflavirus betaspexiguae | ||
| 23622077 | 23622077 | PRJNA690124_P_NODE_32039_length_292_cov_2.429224_g31673_i0 | PRJNA690124 | 32039 | 292 | 2.429224 | 7.09333408 | Capillovirus mali | 28347 | Viruses | Viruses | 477 | 3.77e-130 | NTclustered | gi|1824676451|gb|MK481961.1| | 28347 | g31673 | i0 | 96.233 | 8.9486301369863 | 292 | 10 | 100 | 1 | 1 | 292 | 2921 | 3211 | Apple stem grooving virus isolate Ordos-7, complete genome | blastn | 2613 | 477 | 1 | Viruses | Orthornavirae | Kitrinoviricota | Alsuviricetes | Tymovirales | Betaflexiviridae | Capillovirus | Capillovirus mali |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;